Mercurial > repos > devteam > picard
diff picard_MergeBamAlignment.xml @ 27:fdca9493e09b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 70d2a66c405be58d4413753792bcadf212a4da84
| author | iuc |
|---|---|
| date | Sat, 25 Feb 2023 20:32:54 +0000 |
| parents | a5a13ea16d17 |
| children | c943f4a04af0 |
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--- a/picard_MergeBamAlignment.xml Mon Aug 22 09:54:37 2022 +0000 +++ b/picard_MergeBamAlignment.xml Sat Feb 25 20:32:54 2023 +0000 @@ -2,7 +2,7 @@ <description>merge alignment data with additional info stored in an unmapped BAM dataset</description> <macros> <import>picard_macros.xml</import> - <token name="@WRAPPER_VERSION@">1</token> + <token name="@WRAPPER_VERSION@">2</token> </macros> <expand macro="requirements" /> <command detect_errors="exit_code"><![CDATA[ @@ -176,7 +176,7 @@ <expand macro="VS" /> </inputs> <outputs> - <data name="outFile" format="bam" label="${tool.name} on ${on_string}: BAM with merged alignments"/> + <data name="outFile" format="bam" label="${tool.name} on ${on_string}: BAM"/> </outputs> <tests> <test> @@ -191,7 +191,7 @@ <param name="max_insertions_or_deletions" value="1"/> <param name="read1_trim" value="0"/> <param name="read2_trim" value="0"/> - <param name="orientation" value="FR"/> + <param name="orientations" value="FR"/> <param name="aligner_proper_pair_flags" value="False"/> <param name="primary_alignment_strategy" value="BestMapq"/> <param name="clip_overlapping_reads" value="True"/>