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comparison picard_CollectBaseDistributionByCycle.xml @ 27:fdca9493e09b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 70d2a66c405be58d4413753792bcadf212a4da84
author iuc
date Sat, 25 Feb 2023 20:32:54 +0000
parents a5a13ea16d17
children c943f4a04af0
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26:fc3866ddc7b6 27:fdca9493e09b
1 <tool name="CollectBaseDistributionByCycle" id="picard_CollectBaseDistributionByCycle" version="@TOOL_VERSION@.@WRAPPER_VERSION@"> 1 <tool name="CollectBaseDistributionByCycle" id="picard_CollectBaseDistributionByCycle" version="@TOOL_VERSION@.@WRAPPER_VERSION@">
2 <description>charts the nucleotide distribution per cycle in a SAM or BAM dataset</description> 2 <description>charts the nucleotide distribution per cycle in a SAM or BAM dataset</description>
3 <macros> 3 <macros>
4 <import>picard_macros.xml</import> 4 <import>picard_macros.xml</import>
5 <token name="@WRAPPER_VERSION@">1</token> 5 <token name="@WRAPPER_VERSION@">2</token>
6 </macros> 6 </macros>
7 <expand macro="requirements"> 7 <expand macro="requirements">
8 <requirement type="package" version="3.4.1">r-base</requirement> 8 <requirement type="package" version="3.4.1">r-base</requirement>
9 </expand> 9 </expand>
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
57 <expand macro="VS" /> 57 <expand macro="VS" />
58 58
59 </inputs> 59 </inputs>
60 60
61 <outputs> 61 <outputs>
62 <data format="tabular" name="outFile"/> 62 <data format="tabular" name="outFile" label="${tool.name} on ${on_string}: tabular"/>
63 <data format="pdf" name="pdfFile"/> 63 <data format="pdf" name="pdfFile" label="${tool.name} on ${on_string}: PDF"/>
64 </outputs> 64 </outputs>
65 65
66 <tests> 66 <tests>
67 <test> 67 <test>
68 <param name="aligned_reads_only" value="true" /> 68 <param name="aligned_reads_only" value="true" />