Mercurial > repos > devteam > picard
comparison picard_CollectRnaSeqMetrics.xml @ 28:c943f4a04af0 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
| author | iuc |
|---|---|
| date | Mon, 25 Sep 2023 08:31:14 +0000 |
| parents | 81de93de916f |
| children |
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| 27:fdca9493e09b | 28:c943f4a04af0 |
|---|---|
| 55 METRIC_ACCUMULATION_LEVEL="${metric_accumulation_level}" | 55 METRIC_ACCUMULATION_LEVEL="${metric_accumulation_level}" |
| 56 INPUT='$escaped_element_identifier' | 56 INPUT='$escaped_element_identifier' |
| 57 OUTPUT="${outFile}" | 57 OUTPUT="${outFile}" |
| 58 REFERENCE_SEQUENCE="${reference_fasta_filename}" | 58 REFERENCE_SEQUENCE="${reference_fasta_filename}" |
| 59 ASSUME_SORTED="${assume_sorted}" | 59 ASSUME_SORTED="${assume_sorted}" |
| 60 @TMPDIR_OPTION@ | |
| 61 VALIDATION_STRINGENCY=${validation_stringency} | 60 VALIDATION_STRINGENCY=${validation_stringency} |
| 62 | 61 |
| 63 ]]></command> | 62 ]]></command> |
| 64 | 63 |
| 65 <inputs> | 64 <inputs> |