Mercurial > repos > devteam > package_vcftools_0_1_11

comparison tool_dependencies.xml @ 4:4081df719fff draft

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author devteam
date Sun, 24 Nov 2013 10:24:46 -0500
parents 4ada8c6f2970
children 5fc60c9d748f
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3:4ada8c6f2970 4:4081df719fff
5 <actions> 5 <actions>
6 <action type="download_by_url">http://downloads.sourceforge.net/project/vcftools/vcftools_0.1.11.tar.gz</action> 6 <action type="download_by_url">http://downloads.sourceforge.net/project/vcftools/vcftools_0.1.11.tar.gz</action>
7 <action type="shell_command">make</action> 7 <action type="shell_command">make</action>
8 <action type="shell_command">PREFIX="$INSTALL_DIR/vcftools" make install</action> 8 <action type="shell_command">PREFIX="$INSTALL_DIR/vcftools" make install</action>
9 <!-- For some reason, the vcftools binary does not get installed using 'make install' above, so include manually. --> 9 <!-- For some reason, the vcftools binary does not get installed using 'make install' above, so include manually. -->
10 <action type="shell_command">cp bin/vcftools $INSTALL_DIR/vcftools</action> 10 <action type="shell_command">cp bin/vcftools $INSTALL_DIR/vcftools/bin</action>
11 <action type="set_environment"> 11 <action type="set_environment">
12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable> 12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable>
13 </action> 13 </action>
14 </actions> 14 </actions>
15 </install> 15 </install>