Mercurial > repos > devteam > package_ucsc_viz

comparison tool_dependencies.xml @ 0:1d76d9d48045 draft default tip

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author devteam
date Mon, 12 May 2014 16:52:27 -0400
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-1:000000000000 0:1d76d9d48045
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="ucsc_galaxy_viz" version="0.1">
4 <install version="1.0">
5 <actions_group>
6 <actions os="linux" architecture="x86_64">
7 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/wigToBigWig</action>
8 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bedGraphToBigWig</action>
9 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/faToTwoBit</action>
10 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitToFa</action>
11 <action type="shell_command">chmod ugo+x *</action>
12 <action type="move_directory_files">
13 <source_directory>.</source_directory>
14 <destination_directory>$INSTALL_DIR/bin</destination_directory>
15 </action>
16 </actions>
17
18 <actions os="darwin" architecture="x86_64">
19 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/wigToBigWig</action>
20 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/bedGraphToBigWig</action>
21 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/faToTwoBit</action>
22 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitToFa</action>
23 <action type="shell_command">chmod ugo+x *</action>
24 <action type="move_directory_files">
25 <source_directory>.</source_directory>
26 <destination_directory>$INSTALL_DIR/bin</destination_directory>
27 </action>
28 </actions>
29
30 <action type="set_environment">
31 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
32 </action>
33 </actions_group>
34 </install>
35 <readme>
36 UCSC tools needed for by Galaxy visualization data providers.
37 </readme>
38 </package>
39 </tool_dependency>