Mercurial > repos > devteam > package_sicer_1_1

comparison tool_dependencies.xml @ 1:4f038e0e284a draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_sicer_1_1 commit de7140295cce07e1bc1697e51dab4271c8d7a8a6
author devteam
date Fri, 18 Dec 2015 18:46:52 -0500
parents 3d76021b690e
children
comparison
equal deleted inserted replaced
0:3d76021b690e 1:4f038e0e284a
6 <action type="download_by_url">http://home.gwu.edu/~wpeng/SICER_V1.1.tgz</action> 6 <action type="download_by_url">http://home.gwu.edu/~wpeng/SICER_V1.1.tgz</action>
7 <action type="move_directory_files"> 7 <action type="move_directory_files">
8 <source_directory>.</source_directory> 8 <source_directory>.</source_directory>
9 <destination_directory>$INSTALL_DIR</destination_directory> 9 <destination_directory>$INSTALL_DIR</destination_directory>
10 </action> 10 </action>
11 <action type="shell_command">sed -i 's#PATHTO=.\+#PATHTO=$INSTALL_DIR#' $INSTALL_DIR/SICER/*.sh</action> 11 <action type="shell_command">sed -i -e 's#PATHTO=.\+#PATHTO=$INSTALL_DIR#' $INSTALL_DIR/SICER/*.sh</action>
12 <action type="shell_command">sed -i 's#SICER=.\+#SICER=$INSTALL_DIR/SICER#' $INSTALL_DIR/SICER/*.sh</action> 12 <action type="shell_command">sed -i -e 's#SICER=.\+#SICER=$INSTALL_DIR/SICER#' $INSTALL_DIR/SICER/*.sh</action>
13 <action type="chmod"> 13 <action type="chmod">
14 <file mode="755">$INSTALL_DIR/SICER/SICER.sh</file> 14 <file mode="755">$INSTALL_DIR/SICER/SICER.sh</file>
15 </action> 15 </action>
16 <action type="set_environment"> 16 <action type="set_environment">
17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/SICER</environment_variable> 17 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/SICER</environment_variable>