comparison tool_dependencies.xml @ 2:3a70cdc41d21 default tip

Added $RHOME environment variable
author devteam <devteam@galaxyproject.org>
date Wed, 30 Apr 2014 12:52:01 -0400
parents 6d8161ae668a
children
comparison
equal deleted inserted replaced
1:6d8161ae668a 2:3a70cdc41d21
81 <action type="shell_command">sed -i.bak 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action> 81 <action type="shell_command">sed -i.bak 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action>
82 </actions> 82 </actions>
83 <action type="set_environment"> 83 <action type="set_environment">
84 <environment_variable action="set_to" name="R_ROOT_DIR">$INSTALL_DIR</environment_variable> 84 <environment_variable action="set_to" name="R_ROOT_DIR">$INSTALL_DIR</environment_variable>
85 <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR/lib/R</environment_variable> 85 <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR/lib/R</environment_variable>
86 <environment_variable action="set_to" name="RHOME">$INSTALL_DIR/lib/R</environment_variable>
86 <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable> 87 <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable>
87 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 88 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
88 </action> 89 </action>
89 </actions_group> 90 </actions_group>
90 </install> 91 </install>