Mercurial > repos > devteam > package_r_2_11_0

comparison tool_dependencies.xml @ 4:bd5df464b764

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded tool dependency definition that enables tck/tk for the precompiled linux version.
author devteam
date Tue, 04 Mar 2014 11:20:38 -0500
parents ec964438bb46
children 2c0a13200a73
comparison
equal deleted inserted replaced
3:ec964438bb46 4:bd5df464b764
13 <actions architecture="x86_64" os="linux"> 13 <actions architecture="x86_64" os="linux">
14 <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/R/R-2.11.0-Linux-x86_64.tgz</action> 14 <action type="download_by_url">http://depot.galaxyproject.org/package/linux/x86_64/R/R-2.11.0-Linux-x86_64.tgz</action>
15 <action type="move_directory_files"> 15 <action type="move_directory_files">
16 <source_directory>.</source_directory> 16 <source_directory>.</source_directory>
17 <destination_directory>$INSTALL_DIR</destination_directory> 17 <destination_directory>$INSTALL_DIR</destination_directory>
18 </action>
19 <action type="set_environment">
20 <environment_variable action="set_to" name="TCL_LIBRARY">$INSTALL_DIR/lib/libtcl8.4.so</environment_variable>
21 <environment_variable action="set_to" name="TK_LIBRARY">$INSTALL_DIR/lib/libtk8.4.so</environment_variable>
18 </action> 22 </action>
19 </actions> 23 </actions>
20 <actions> 24 <actions>
21 <package name="readline" version="6.2"> 25 <package name="readline" version="6.2">
22 <repository changeset_revision="f4201ff5aa66" name="package_readline_6_2" owner="devteam" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> 26 <repository changeset_revision="f4201ff5aa66" name="package_readline_6_2" owner="devteam" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
57 export LDFLAGS="$LDFLAGS -Wl,-rpath,$PNG_LIB_PATH" &amp;&amp; 61 export LDFLAGS="$LDFLAGS -Wl,-rpath,$PNG_LIB_PATH" &amp;&amp;
58 export LDFLAGS="$LDFLAGS -Wl,-rpath,$FREETYPE_LIB_PATH" &amp;&amp; 62 export LDFLAGS="$LDFLAGS -Wl,-rpath,$FREETYPE_LIB_PATH" &amp;&amp;
59 export CFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDES" &amp;&amp; 63 export CFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDES" &amp;&amp;
60 export CXXFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDES" &amp;&amp; 64 export CXXFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDES" &amp;&amp;
61 export CPPFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDES" &amp;&amp; 65 export CPPFLAGS="-I$PNG_INCLUDES -I$READLINE_INCLUDES" &amp;&amp;
62 ./configure --with-blas \ 66 ./configure --with-tcltk \
67 --with-blas \
63 --with-lapack \ 68 --with-lapack \
64 --with-readline \ 69 --with-readline \
65 --with-cairo \ 70 --with-cairo \
66 --with-libpng \ 71 --with-libpng \
67 --without-x \ 72 --without-x \
69 --disable-R-framework \ 74 --disable-R-framework \
70 --libdir=$INSTALL_DIR/lib \ 75 --libdir=$INSTALL_DIR/lib \
71 --prefix=$INSTALL_DIR 76 --prefix=$INSTALL_DIR
72 </action> 77 </action>
73 <action type="make_install" /> 78 <action type="make_install" />
74 <action type="shell_command">sed -i 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R</action> 79 <action type="shell_command">sed -i.bak 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R</action>
80 <action type="shell_command">sed -i.bak 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R</action>
75 </actions> 81 </actions>
76 <action type="set_environment"> 82 <action type="set_environment">
77 <environment_variable action="set_to" name="R_ROOT_DIR">$INSTALL_DIR</environment_variable> 83 <environment_variable action="set_to" name="R_ROOT_DIR">$INSTALL_DIR</environment_variable>
78 <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR/lib/R</environment_variable> 84 <environment_variable action="set_to" name="R_HOME">$INSTALL_DIR/lib/R</environment_variable>
79 <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable> 85 <environment_variable action="set_to" name="R_LIBS">$INSTALL_DIR/lib/R/library</environment_variable>
80 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 86 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
81 </action> 87 </action>
82 </actions_group> 88 </actions_group>
83 </install> 89 </install>
84 <readme> 90 <readme>
85 The precompiled Linux version of this package was built 2014-02-28. 91 The precompiled Linux version of this package was built 2014-03-04.
86 The precompiled OSX version of this package was built 2014-03-03. 92 The precompiled OSX version of this package was built 2014-03-03.
87 R is a free software environment for statistical computing and graphics. 93 R is a free software environment for statistical computing and graphics.
88 NOTE: See custom compilation options above 94 NOTE: See custom compilation options above.
89 </readme> 95 </readme>
90 </package> 96 </package>
91 </tool_dependency> 97 </tool_dependency>