Mercurial > repos > devteam > package_fastqc_0_11_2

comparison tool_dependencies.xml @ 0:c07d9c8ee56e draft default tip

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author devteam
date Tue, 11 Nov 2014 12:16:18 -0500
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-1:000000000000 0:c07d9c8ee56e
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="FastQC" version="0.11.2">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.2.zip</action>
7 <action type="move_directory_files">
8 <source_directory>.</source_directory>
9 <destination_directory>$INSTALL_DIR</destination_directory>
10 </action>
11 <action type="chmod">
12 <file mode="755">$INSTALL_DIR/fastqc</file>
13 </action>
14 <action type="set_environment">
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
16 <environment_variable name="FASTQC_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
17 </action>
18 </actions>
19 </install>
20 <readme></readme>
21 </package>
22 </tool_dependency>