Mercurial > repos > devteam > package_emboss_5_0_0

comparison tool_dependencies.xml @ 1:f117a9d9dc9c draft

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Update the tool_dependencies.xml to use a single <actions> tag set.
author devteam
date Tue, 25 Jun 2013 13:50:00 -0400
parents 9fd501d0f295
children 3569b0e8a8c1
comparison
equal deleted inserted replaced
0:9fd501d0f295 1:f117a9d9dc9c
17 ./configure --prefix=$INSTALL_DIR 17 ./configure --prefix=$INSTALL_DIR
18 else 18 else
19 ./configure --prefix=$INSTALL_DIR --x-includes=$X11_INCLUDE_DIR --x-libraries=$X11_LIB_DIR 19 ./configure --prefix=$INSTALL_DIR --x-includes=$X11_INCLUDE_DIR --x-libraries=$X11_LIB_DIR
20 fi 20 fi
21 </action> 21 </action>
22 <action type="shell_command">make</action> 22 <action type="shell_command">make &amp;&amp; make install</action>
23 <action type="shell_command">make install</action> 23 <action type="download_file" extract="true">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/PHYLIP-3.6b.tar.gz</action>
24 </actions> 24 <action type="change_directory">PHYLIP-3.6b</action>
25 <actions>
26 <action type="download_by_url">ftp://emboss.open-bio.org/pub/EMBOSS/old/5.0.0/PHYLIP-3.6b.tar.gz</action>
27 <action type="set_environment_for_install">
28 <repository changeset_revision="90c1cbb8095a" name="package_x11_client_1_5_proto_7_0" owner="devteam" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu">
29 <package name="libx11" version="1.5.0" />
30 </repository>
31 </action>
32 <action type="shell_command"> 25 <action type="shell_command">
33 if [ -z $X11_LIB_DIR ] || [ -z $X11_INCLUDE_DIR ]; then 26 if [ -z $X11_LIB_DIR ] || [ -z $X11_INCLUDE_DIR ]; then
34 ./configure --prefix=$INSTALL_DIR 27 ./configure --prefix=$INSTALL_DIR
35 else 28 else
36 ./configure --prefix=$INSTALL_DIR --x-includes=$X11_INCLUDE_DIR --x-libraries=$X11_LIB_DIR CFLAGS='-I$INSTALL_DIR/include' 29 ./configure --prefix=$INSTALL_DIR --x-includes=$X11_INCLUDE_DIR --x-libraries=$X11_LIB_DIR CFLAGS='-I../include'
37 fi 30 fi
38 </action> 31 </action>
39 <action type="shell_command">make</action> 32 <action type="shell_command">make &amp;&amp; make install</action>
40 <action type="shell_command">make install</action>
41 </actions> 33 </actions>
42 </install> 34 </install>
43 <readme> 35 <readme>
44 These links provide information for building the Emboss package in most environments. 36 These links provide information for building the Emboss package in most environments.
45 37