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comparison test-data/tblastn_four_human_vs_rhodopsin.xml @ 0:432ea9614cc9 draft

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Uploaded v0.1.02 preview 1, using tool_data_table_conf.xml for loc files, etc
author peterjc
date Fri, 30 Jan 2015 08:27:28 -0500
parents
children 0e86300e49c0
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-1:000000000000 0:432ea9614cc9
1 <?xml version="1.0"?>
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3 <BlastOutput>
4 <BlastOutput_program>tblastn</BlastOutput_program>
5 <BlastOutput_version>TBLASTN 2.2.30+</BlastOutput_version>
6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
7 <BlastOutput_db></BlastOutput_db>
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9 <BlastOutput_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</BlastOutput_query-def>
10 <BlastOutput_query-len>406</BlastOutput_query-len>
11 <BlastOutput_param>
12 <Parameters>
13 <Parameters_matrix>BLOSUM80</Parameters_matrix>
14 <Parameters_expect>1e-10</Parameters_expect>
15 <Parameters_gap-open>10</Parameters_gap-open>
16 <Parameters_gap-extend>1</Parameters_gap-extend>
17 <Parameters_filter>F</Parameters_filter>
18 </Parameters>
19 </BlastOutput_param>
20 <BlastOutput_iterations>
21 <Iteration>
22 <Iteration_iter-num>1</Iteration_iter-num>
23 <Iteration_query-ID>Query_1</Iteration_query-ID>
24 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
25 <Iteration_query-len>406</Iteration_query-len>
26 <Iteration_hits>
27 </Iteration_hits>
28 <Iteration_stat>
29 <Statistics>
30 <Statistics_db-num>0</Statistics_db-num>
31 <Statistics_db-len>0</Statistics_db-len>
32 <Statistics_hsp-len>19</Statistics_hsp-len>
33 <Statistics_eff-space>127710</Statistics_eff-space>
34 <Statistics_kappa>0.071</Statistics_kappa>
35 <Statistics_lambda>0.299</Statistics_lambda>
36 <Statistics_entropy>0.27</Statistics_entropy>
37 </Statistics>
38 </Iteration_stat>
39 <Iteration_message>No hits found</Iteration_message>
40 </Iteration>
41 <Iteration>
42 <Iteration_iter-num>2</Iteration_iter-num>
43 <Iteration_query-ID>Query_1</Iteration_query-ID>
44 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
45 <Iteration_query-len>406</Iteration_query-len>
46 <Iteration_hits>
47 </Iteration_hits>
48 <Iteration_stat>
49 <Statistics>
50 <Statistics_db-num>0</Statistics_db-num>
51 <Statistics_db-len>0</Statistics_db-len>
52 <Statistics_hsp-len>19</Statistics_hsp-len>
53 <Statistics_eff-space>127710</Statistics_eff-space>
54 <Statistics_kappa>0.071</Statistics_kappa>
55 <Statistics_lambda>0.299</Statistics_lambda>
56 <Statistics_entropy>0.27</Statistics_entropy>
57 </Statistics>
58 </Iteration_stat>
59 <Iteration_message>No hits found</Iteration_message>
60 </Iteration>
61 <Iteration>
62 <Iteration_iter-num>3</Iteration_iter-num>
63 <Iteration_query-ID>Query_1</Iteration_query-ID>
64 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
65 <Iteration_query-len>406</Iteration_query-len>
66 <Iteration_hits>
67 </Iteration_hits>
68 <Iteration_stat>
69 <Statistics>
70 <Statistics_db-num>0</Statistics_db-num>
71 <Statistics_db-len>0</Statistics_db-len>
72 <Statistics_hsp-len>19</Statistics_hsp-len>
73 <Statistics_eff-space>127710</Statistics_eff-space>
74 <Statistics_kappa>0.071</Statistics_kappa>
75 <Statistics_lambda>0.299</Statistics_lambda>
76 <Statistics_entropy>0.27</Statistics_entropy>
77 </Statistics>
78 </Iteration_stat>
79 <Iteration_message>No hits found</Iteration_message>
80 </Iteration>
81 <Iteration>
82 <Iteration_iter-num>4</Iteration_iter-num>
83 <Iteration_query-ID>Query_1</Iteration_query-ID>
84 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
85 <Iteration_query-len>406</Iteration_query-len>
86 <Iteration_hits>
87 </Iteration_hits>
88 <Iteration_stat>
89 <Statistics>
90 <Statistics_db-num>0</Statistics_db-num>
91 <Statistics_db-len>0</Statistics_db-len>
92 <Statistics_hsp-len>19</Statistics_hsp-len>
93 <Statistics_eff-space>127710</Statistics_eff-space>
94 <Statistics_kappa>0.071</Statistics_kappa>
95 <Statistics_lambda>0.299</Statistics_lambda>
96 <Statistics_entropy>0.27</Statistics_entropy>
97 </Statistics>
98 </Iteration_stat>
99 <Iteration_message>No hits found</Iteration_message>
100 </Iteration>
101 <Iteration>
102 <Iteration_iter-num>5</Iteration_iter-num>
103 <Iteration_query-ID>Query_1</Iteration_query-ID>
104 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
105 <Iteration_query-len>406</Iteration_query-len>
106 <Iteration_hits>
107 </Iteration_hits>
108 <Iteration_stat>
109 <Statistics>
110 <Statistics_db-num>0</Statistics_db-num>
111 <Statistics_db-len>0</Statistics_db-len>
112 <Statistics_hsp-len>19</Statistics_hsp-len>
113 <Statistics_eff-space>127710</Statistics_eff-space>
114 <Statistics_kappa>0.071</Statistics_kappa>
115 <Statistics_lambda>0.299</Statistics_lambda>
116 <Statistics_entropy>0.27</Statistics_entropy>
117 </Statistics>
118 </Iteration_stat>
119 <Iteration_message>No hits found</Iteration_message>
120 </Iteration>
121 <Iteration>
122 <Iteration_iter-num>6</Iteration_iter-num>
123 <Iteration_query-ID>Query_1</Iteration_query-ID>
124 <Iteration_query-def>sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def>
125 <Iteration_query-len>406</Iteration_query-len>
126 <Iteration_hits>
127 </Iteration_hits>
128 <Iteration_stat>
129 <Statistics>
130 <Statistics_db-num>0</Statistics_db-num>
131 <Statistics_db-len>0</Statistics_db-len>
132 <Statistics_hsp-len>19</Statistics_hsp-len>
133 <Statistics_eff-space>127710</Statistics_eff-space>
134 <Statistics_kappa>0.071</Statistics_kappa>
135 <Statistics_lambda>0.299</Statistics_lambda>
136 <Statistics_entropy>0.27</Statistics_entropy>
137 </Statistics>
138 </Iteration_stat>
139 <Iteration_message>No hits found</Iteration_message>
140 </Iteration>
141 <Iteration>
142 <Iteration_iter-num>7</Iteration_iter-num>
143 <Iteration_query-ID>Query_2</Iteration_query-ID>
144 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
145 <Iteration_query-len>1161</Iteration_query-len>
146 <Iteration_hits>
147 </Iteration_hits>
148 <Iteration_stat>
149 <Statistics>
150 <Statistics_db-num>0</Statistics_db-num>
151 <Statistics_db-len>0</Statistics_db-len>
152 <Statistics_hsp-len>23</Statistics_hsp-len>
153 <Statistics_eff-space>370988</Statistics_eff-space>
154 <Statistics_kappa>0.071</Statistics_kappa>
155 <Statistics_lambda>0.299</Statistics_lambda>
156 <Statistics_entropy>0.27</Statistics_entropy>
157 </Statistics>
158 </Iteration_stat>
159 <Iteration_message>No hits found</Iteration_message>
160 </Iteration>
161 <Iteration>
162 <Iteration_iter-num>8</Iteration_iter-num>
163 <Iteration_query-ID>Query_2</Iteration_query-ID>
164 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
165 <Iteration_query-len>1161</Iteration_query-len>
166 <Iteration_hits>
167 </Iteration_hits>
168 <Iteration_stat>
169 <Statistics>
170 <Statistics_db-num>0</Statistics_db-num>
171 <Statistics_db-len>0</Statistics_db-len>
172 <Statistics_hsp-len>23</Statistics_hsp-len>
173 <Statistics_eff-space>370988</Statistics_eff-space>
174 <Statistics_kappa>0.071</Statistics_kappa>
175 <Statistics_lambda>0.299</Statistics_lambda>
176 <Statistics_entropy>0.27</Statistics_entropy>
177 </Statistics>
178 </Iteration_stat>
179 <Iteration_message>No hits found</Iteration_message>
180 </Iteration>
181 <Iteration>
182 <Iteration_iter-num>9</Iteration_iter-num>
183 <Iteration_query-ID>Query_2</Iteration_query-ID>
184 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
185 <Iteration_query-len>1161</Iteration_query-len>
186 <Iteration_hits>
187 </Iteration_hits>
188 <Iteration_stat>
189 <Statistics>
190 <Statistics_db-num>0</Statistics_db-num>
191 <Statistics_db-len>0</Statistics_db-len>
192 <Statistics_hsp-len>23</Statistics_hsp-len>
193 <Statistics_eff-space>370988</Statistics_eff-space>
194 <Statistics_kappa>0.071</Statistics_kappa>
195 <Statistics_lambda>0.299</Statistics_lambda>
196 <Statistics_entropy>0.27</Statistics_entropy>
197 </Statistics>
198 </Iteration_stat>
199 <Iteration_message>No hits found</Iteration_message>
200 </Iteration>
201 <Iteration>
202 <Iteration_iter-num>10</Iteration_iter-num>
203 <Iteration_query-ID>Query_2</Iteration_query-ID>
204 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
205 <Iteration_query-len>1161</Iteration_query-len>
206 <Iteration_hits>
207 </Iteration_hits>
208 <Iteration_stat>
209 <Statistics>
210 <Statistics_db-num>0</Statistics_db-num>
211 <Statistics_db-len>0</Statistics_db-len>
212 <Statistics_hsp-len>23</Statistics_hsp-len>
213 <Statistics_eff-space>370988</Statistics_eff-space>
214 <Statistics_kappa>0.071</Statistics_kappa>
215 <Statistics_lambda>0.299</Statistics_lambda>
216 <Statistics_entropy>0.27</Statistics_entropy>
217 </Statistics>
218 </Iteration_stat>
219 <Iteration_message>No hits found</Iteration_message>
220 </Iteration>
221 <Iteration>
222 <Iteration_iter-num>11</Iteration_iter-num>
223 <Iteration_query-ID>Query_2</Iteration_query-ID>
224 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
225 <Iteration_query-len>1161</Iteration_query-len>
226 <Iteration_hits>
227 </Iteration_hits>
228 <Iteration_stat>
229 <Statistics>
230 <Statistics_db-num>0</Statistics_db-num>
231 <Statistics_db-len>0</Statistics_db-len>
232 <Statistics_hsp-len>23</Statistics_hsp-len>
233 <Statistics_eff-space>370988</Statistics_eff-space>
234 <Statistics_kappa>0.071</Statistics_kappa>
235 <Statistics_lambda>0.299</Statistics_lambda>
236 <Statistics_entropy>0.27</Statistics_entropy>
237 </Statistics>
238 </Iteration_stat>
239 <Iteration_message>No hits found</Iteration_message>
240 </Iteration>
241 <Iteration>
242 <Iteration_iter-num>12</Iteration_iter-num>
243 <Iteration_query-ID>Query_2</Iteration_query-ID>
244 <Iteration_query-def>sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def>
245 <Iteration_query-len>1161</Iteration_query-len>
246 <Iteration_hits>
247 </Iteration_hits>
248 <Iteration_stat>
249 <Statistics>
250 <Statistics_db-num>0</Statistics_db-num>
251 <Statistics_db-len>0</Statistics_db-len>
252 <Statistics_hsp-len>23</Statistics_hsp-len>
253 <Statistics_eff-space>370988</Statistics_eff-space>
254 <Statistics_kappa>0.071</Statistics_kappa>
255 <Statistics_lambda>0.299</Statistics_lambda>
256 <Statistics_entropy>0.27</Statistics_entropy>
257 </Statistics>
258 </Iteration_stat>
259 <Iteration_message>No hits found</Iteration_message>
260 </Iteration>
261 <Iteration>
262 <Iteration_iter-num>13</Iteration_iter-num>
263 <Iteration_query-ID>Query_3</Iteration_query-ID>
264 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
265 <Iteration_query-len>1382</Iteration_query-len>
266 <Iteration_hits>
267 </Iteration_hits>
268 <Iteration_stat>
269 <Statistics>
270 <Statistics_db-num>0</Statistics_db-num>
271 <Statistics_db-len>0</Statistics_db-len>
272 <Statistics_hsp-len>24</Statistics_hsp-len>
273 <Statistics_eff-space>441350</Statistics_eff-space>
274 <Statistics_kappa>0.071</Statistics_kappa>
275 <Statistics_lambda>0.299</Statistics_lambda>
276 <Statistics_entropy>0.27</Statistics_entropy>
277 </Statistics>
278 </Iteration_stat>
279 <Iteration_message>No hits found</Iteration_message>
280 </Iteration>
281 <Iteration>
282 <Iteration_iter-num>14</Iteration_iter-num>
283 <Iteration_query-ID>Query_3</Iteration_query-ID>
284 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
285 <Iteration_query-len>1382</Iteration_query-len>
286 <Iteration_hits>
287 </Iteration_hits>
288 <Iteration_stat>
289 <Statistics>
290 <Statistics_db-num>0</Statistics_db-num>
291 <Statistics_db-len>0</Statistics_db-len>
292 <Statistics_hsp-len>24</Statistics_hsp-len>
293 <Statistics_eff-space>441350</Statistics_eff-space>
294 <Statistics_kappa>0.071</Statistics_kappa>
295 <Statistics_lambda>0.299</Statistics_lambda>
296 <Statistics_entropy>0.27</Statistics_entropy>
297 </Statistics>
298 </Iteration_stat>
299 <Iteration_message>No hits found</Iteration_message>
300 </Iteration>
301 <Iteration>
302 <Iteration_iter-num>15</Iteration_iter-num>
303 <Iteration_query-ID>Query_3</Iteration_query-ID>
304 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
305 <Iteration_query-len>1382</Iteration_query-len>
306 <Iteration_hits>
307 </Iteration_hits>
308 <Iteration_stat>
309 <Statistics>
310 <Statistics_db-num>0</Statistics_db-num>
311 <Statistics_db-len>0</Statistics_db-len>
312 <Statistics_hsp-len>24</Statistics_hsp-len>
313 <Statistics_eff-space>441350</Statistics_eff-space>
314 <Statistics_kappa>0.071</Statistics_kappa>
315 <Statistics_lambda>0.299</Statistics_lambda>
316 <Statistics_entropy>0.27</Statistics_entropy>
317 </Statistics>
318 </Iteration_stat>
319 <Iteration_message>No hits found</Iteration_message>
320 </Iteration>
321 <Iteration>
322 <Iteration_iter-num>16</Iteration_iter-num>
323 <Iteration_query-ID>Query_3</Iteration_query-ID>
324 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
325 <Iteration_query-len>1382</Iteration_query-len>
326 <Iteration_hits>
327 </Iteration_hits>
328 <Iteration_stat>
329 <Statistics>
330 <Statistics_db-num>0</Statistics_db-num>
331 <Statistics_db-len>0</Statistics_db-len>
332 <Statistics_hsp-len>24</Statistics_hsp-len>
333 <Statistics_eff-space>441350</Statistics_eff-space>
334 <Statistics_kappa>0.071</Statistics_kappa>
335 <Statistics_lambda>0.299</Statistics_lambda>
336 <Statistics_entropy>0.27</Statistics_entropy>
337 </Statistics>
338 </Iteration_stat>
339 <Iteration_message>No hits found</Iteration_message>
340 </Iteration>
341 <Iteration>
342 <Iteration_iter-num>17</Iteration_iter-num>
343 <Iteration_query-ID>Query_3</Iteration_query-ID>
344 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
345 <Iteration_query-len>1382</Iteration_query-len>
346 <Iteration_hits>
347 </Iteration_hits>
348 <Iteration_stat>
349 <Statistics>
350 <Statistics_db-num>0</Statistics_db-num>
351 <Statistics_db-len>0</Statistics_db-len>
352 <Statistics_hsp-len>24</Statistics_hsp-len>
353 <Statistics_eff-space>441350</Statistics_eff-space>
354 <Statistics_kappa>0.071</Statistics_kappa>
355 <Statistics_lambda>0.299</Statistics_lambda>
356 <Statistics_entropy>0.27</Statistics_entropy>
357 </Statistics>
358 </Iteration_stat>
359 <Iteration_message>No hits found</Iteration_message>
360 </Iteration>
361 <Iteration>
362 <Iteration_iter-num>18</Iteration_iter-num>
363 <Iteration_query-ID>Query_3</Iteration_query-ID>
364 <Iteration_query-def>sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def>
365 <Iteration_query-len>1382</Iteration_query-len>
366 <Iteration_hits>
367 </Iteration_hits>
368 <Iteration_stat>
369 <Statistics>
370 <Statistics_db-num>0</Statistics_db-num>
371 <Statistics_db-len>0</Statistics_db-len>
372 <Statistics_hsp-len>24</Statistics_hsp-len>
373 <Statistics_eff-space>441350</Statistics_eff-space>
374 <Statistics_kappa>0.071</Statistics_kappa>
375 <Statistics_lambda>0.299</Statistics_lambda>
376 <Statistics_entropy>0.27</Statistics_entropy>
377 </Statistics>
378 </Iteration_stat>
379 <Iteration_message>No hits found</Iteration_message>
380 </Iteration>
381 <Iteration>
382 <Iteration_iter-num>19</Iteration_iter-num>
383 <Iteration_query-ID>Query_4</Iteration_query-ID>
384 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
385 <Iteration_query-len>348</Iteration_query-len>
386 <Iteration_hits>
387 <Hit>
388 <Hit_num>1</Hit_num>
389 <Hit_id>Subject_1</Hit_id>
390 <Hit_def>gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA</Hit_def>
391 <Hit_accession>Subject_1</Hit_accession>
392 <Hit_len>1047</Hit_len>
393 <Hit_hsps>
394 <Hsp>
395 <Hsp_num>1</Hsp_num>
396 <Hsp_bit-score>732.393</Hsp_bit-score>
397 <Hsp_score>1689</Hsp_score>
398 <Hsp_evalue>0</Hsp_evalue>
399 <Hsp_query-from>1</Hsp_query-from>
400 <Hsp_query-to>348</Hsp_query-to>
401 <Hsp_hit-from>1</Hsp_hit-from>
402 <Hsp_hit-to>1044</Hsp_hit-to>
403 <Hsp_query-frame>0</Hsp_query-frame>
404 <Hsp_hit-frame>1</Hsp_hit-frame>
405 <Hsp_identity>336</Hsp_identity>
406 <Hsp_positive>343</Hsp_positive>
407 <Hsp_gaps>0</Hsp_gaps>
408 <Hsp_align-len>348</Hsp_align-len>
409 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
410 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq>
411 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline>
412 </Hsp>
413 </Hit_hsps>
414 </Hit>
415 </Iteration_hits>
416 <Iteration_stat>
417 <Statistics>
418 <Statistics_db-num>0</Statistics_db-num>
419 <Statistics_db-len>0</Statistics_db-len>
420 <Statistics_hsp-len>18</Statistics_hsp-len>
421 <Statistics_eff-space>109230</Statistics_eff-space>
422 <Statistics_kappa>0.071</Statistics_kappa>
423 <Statistics_lambda>0.299</Statistics_lambda>
424 <Statistics_entropy>0.27</Statistics_entropy>
425 </Statistics>
426 </Iteration_stat>
427 </Iteration>
428 <Iteration>
429 <Iteration_iter-num>20</Iteration_iter-num>
430 <Iteration_query-ID>Query_4</Iteration_query-ID>
431 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
432 <Iteration_query-len>348</Iteration_query-len>
433 <Iteration_hits>
434 <Hit>
435 <Hit_num>1</Hit_num>
436 <Hit_id>Subject_2</Hit_id>
437 <Hit_def>gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds</Hit_def>
438 <Hit_accession>Subject_2</Hit_accession>
439 <Hit_len>1574</Hit_len>
440 <Hit_hsps>
441 <Hsp>
442 <Hsp_num>1</Hsp_num>
443 <Hsp_bit-score>646.12</Hsp_bit-score>
444 <Hsp_score>1489</Hsp_score>
445 <Hsp_evalue>0</Hsp_evalue>
446 <Hsp_query-from>1</Hsp_query-from>
447 <Hsp_query-to>341</Hsp_query-to>
448 <Hsp_hit-from>42</Hsp_hit-from>
449 <Hsp_hit-to>1067</Hsp_hit-to>
450 <Hsp_query-frame>0</Hsp_query-frame>
451 <Hsp_hit-frame>3</Hsp_hit-frame>
452 <Hsp_identity>290</Hsp_identity>
453 <Hsp_positive>320</Hsp_positive>
454 <Hsp_gaps>1</Hsp_gaps>
455 <Hsp_align-len>342</Hsp_align-len>
456 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq>
457 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq>
458 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE</Hsp_midline>
459 </Hsp>
460 </Hit_hsps>
461 </Hit>
462 </Iteration_hits>
463 <Iteration_stat>
464 <Statistics>
465 <Statistics_db-num>0</Statistics_db-num>
466 <Statistics_db-len>0</Statistics_db-len>
467 <Statistics_hsp-len>18</Statistics_hsp-len>
468 <Statistics_eff-space>109230</Statistics_eff-space>
469 <Statistics_kappa>0.071</Statistics_kappa>
470 <Statistics_lambda>0.299</Statistics_lambda>
471 <Statistics_entropy>0.27</Statistics_entropy>
472 </Statistics>
473 </Iteration_stat>
474 </Iteration>
475 <Iteration>
476 <Iteration_iter-num>21</Iteration_iter-num>
477 <Iteration_query-ID>Query_4</Iteration_query-ID>
478 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
479 <Iteration_query-len>348</Iteration_query-len>
480 <Iteration_hits>
481 <Hit>
482 <Hit_num>1</Hit_num>
483 <Hit_id>Subject_3</Hit_id>
484 <Hit_def>gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds</Hit_def>
485 <Hit_accession>Subject_3</Hit_accession>
486 <Hit_len>4301</Hit_len>
487 <Hit_hsps>
488 <Hsp>
489 <Hsp_num>1</Hsp_num>
490 <Hsp_bit-score>151.343</Hsp_bit-score>
491 <Hsp_score>342</Hsp_score>
492 <Hsp_evalue>1.39567e-72</Hsp_evalue>
493 <Hsp_query-from>239</Hsp_query-from>
494 <Hsp_query-to>312</Hsp_query-to>
495 <Hsp_hit-from>3147</Hsp_hit-from>
496 <Hsp_hit-to>3368</Hsp_hit-to>
497 <Hsp_query-frame>0</Hsp_query-frame>
498 <Hsp_hit-frame>3</Hsp_hit-frame>
499 <Hsp_identity>69</Hsp_identity>
500 <Hsp_positive>73</Hsp_positive>
501 <Hsp_gaps>0</Hsp_gaps>
502 <Hsp_align-len>74</Hsp_align-len>
503 <Hsp_qseq>ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ</Hsp_qseq>
504 <Hsp_hseq>ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ</Hsp_hseq>
505 <Hsp_midline>ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ</Hsp_midline>
506 </Hsp>
507 <Hsp>
508 <Hsp_num>2</Hsp_num>
509 <Hsp_bit-score>126.324</Hsp_bit-score>
510 <Hsp_score>284</Hsp_score>
511 <Hsp_evalue>1.39567e-72</Hsp_evalue>
512 <Hsp_query-from>177</Hsp_query-from>
513 <Hsp_query-to>235</Hsp_query-to>
514 <Hsp_hit-from>2855</Hsp_hit-from>
515 <Hsp_hit-to>3031</Hsp_hit-to>
516 <Hsp_query-frame>0</Hsp_query-frame>
517 <Hsp_hit-frame>2</Hsp_hit-frame>
518 <Hsp_identity>54</Hsp_identity>
519 <Hsp_positive>57</Hsp_positive>
520 <Hsp_gaps>0</Hsp_gaps>
521 <Hsp_align-len>59</Hsp_align-len>
522 <Hsp_qseq>RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA</Hsp_qseq>
523 <Hsp_hseq>RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS</Hsp_hseq>
524 <Hsp_midline>RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +</Hsp_midline>
525 </Hsp>
526 <Hsp>
527 <Hsp_num>3</Hsp_num>
528 <Hsp_bit-score>229.42</Hsp_bit-score>
529 <Hsp_score>523</Hsp_score>
530 <Hsp_evalue>9.34154e-67</Hsp_evalue>
531 <Hsp_query-from>11</Hsp_query-from>
532 <Hsp_query-to>121</Hsp_query-to>
533 <Hsp_hit-from>1</Hsp_hit-from>
534 <Hsp_hit-to>333</Hsp_hit-to>
535 <Hsp_query-frame>0</Hsp_query-frame>
536 <Hsp_hit-frame>1</Hsp_hit-frame>
537 <Hsp_identity>107</Hsp_identity>
538 <Hsp_positive>109</Hsp_positive>
539 <Hsp_gaps>0</Hsp_gaps>
540 <Hsp_align-len>111</Hsp_align-len>
541 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_qseq>
542 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_hseq>
543 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG</Hsp_midline>
544 </Hsp>
545 <Hsp>
546 <Hsp_num>4</Hsp_num>
547 <Hsp_bit-score>122.873</Hsp_bit-score>
548 <Hsp_score>276</Hsp_score>
549 <Hsp_evalue>1.03783e-32</Hsp_evalue>
550 <Hsp_query-from>119</Hsp_query-from>
551 <Hsp_query-to>177</Hsp_query-to>
552 <Hsp_hit-from>1404</Hsp_hit-from>
553 <Hsp_hit-to>1580</Hsp_hit-to>
554 <Hsp_query-frame>0</Hsp_query-frame>
555 <Hsp_hit-frame>3</Hsp_hit-frame>
556 <Hsp_identity>55</Hsp_identity>
557 <Hsp_positive>56</Hsp_positive>
558 <Hsp_gaps>0</Hsp_gaps>
559 <Hsp_align-len>59</Hsp_align-len>
560 <Hsp_qseq>LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR</Hsp_qseq>
561 <Hsp_hseq>LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR</Hsp_hseq>
562 <Hsp_midline>L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR</Hsp_midline>
563 </Hsp>
564 <Hsp>
565 <Hsp_num>5</Hsp_num>
566 <Hsp_bit-score>57.7368</Hsp_bit-score>
567 <Hsp_score>125</Hsp_score>
568 <Hsp_evalue>1.50808e-12</Hsp_evalue>
569 <Hsp_query-from>312</Hsp_query-from>
570 <Hsp_query-to>337</Hsp_query-to>
571 <Hsp_hit-from>4222</Hsp_hit-from>
572 <Hsp_hit-to>4299</Hsp_hit-to>
573 <Hsp_query-frame>0</Hsp_query-frame>
574 <Hsp_hit-frame>1</Hsp_hit-frame>
575 <Hsp_identity>23</Hsp_identity>
576 <Hsp_positive>24</Hsp_positive>
577 <Hsp_gaps>0</Hsp_gaps>
578 <Hsp_align-len>26</Hsp_align-len>
579 <Hsp_qseq>QFRNCMLTTICCGKNPLGDDEASATV</Hsp_qseq>
580 <Hsp_hseq>QFRNCMLTTLCCGKNPLGDDEASTTA</Hsp_hseq>
581 <Hsp_midline>QFRNCMLTT+CCGKNPLGDDEAS T </Hsp_midline>
582 </Hsp>
583 </Hit_hsps>
584 </Hit>
585 </Iteration_hits>
586 <Iteration_stat>
587 <Statistics>
588 <Statistics_db-num>0</Statistics_db-num>
589 <Statistics_db-len>0</Statistics_db-len>
590 <Statistics_hsp-len>18</Statistics_hsp-len>
591 <Statistics_eff-space>109230</Statistics_eff-space>
592 <Statistics_kappa>0.071</Statistics_kappa>
593 <Statistics_lambda>0.299</Statistics_lambda>
594 <Statistics_entropy>0.27</Statistics_entropy>
595 </Statistics>
596 </Iteration_stat>
597 </Iteration>
598 <Iteration>
599 <Iteration_iter-num>22</Iteration_iter-num>
600 <Iteration_query-ID>Query_4</Iteration_query-ID>
601 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
602 <Iteration_query-len>348</Iteration_query-len>
603 <Iteration_hits>
604 <Hit>
605 <Hit_num>1</Hit_num>
606 <Hit_id>Subject_4</Hit_id>
607 <Hit_def>gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds</Hit_def>
608 <Hit_accession>Subject_4</Hit_accession>
609 <Hit_len>983</Hit_len>
610 <Hit_hsps>
611 <Hsp>
612 <Hsp_num>1</Hsp_num>
613 <Hsp_bit-score>658.198</Hsp_bit-score>
614 <Hsp_score>1517</Hsp_score>
615 <Hsp_evalue>0</Hsp_evalue>
616 <Hsp_query-from>11</Hsp_query-from>
617 <Hsp_query-to>336</Hsp_query-to>
618 <Hsp_hit-from>1</Hsp_hit-from>
619 <Hsp_hit-to>978</Hsp_hit-to>
620 <Hsp_query-frame>0</Hsp_query-frame>
621 <Hsp_hit-frame>1</Hsp_hit-frame>
622 <Hsp_identity>310</Hsp_identity>
623 <Hsp_positive>322</Hsp_positive>
624 <Hsp_gaps>0</Hsp_gaps>
625 <Hsp_align-len>326</Hsp_align-len>
626 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT</Hsp_qseq>
627 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT</Hsp_hseq>
628 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T</Hsp_midline>
629 </Hsp>
630 </Hit_hsps>
631 </Hit>
632 </Iteration_hits>
633 <Iteration_stat>
634 <Statistics>
635 <Statistics_db-num>0</Statistics_db-num>
636 <Statistics_db-len>0</Statistics_db-len>
637 <Statistics_hsp-len>18</Statistics_hsp-len>
638 <Statistics_eff-space>109230</Statistics_eff-space>
639 <Statistics_kappa>0.071</Statistics_kappa>
640 <Statistics_lambda>0.299</Statistics_lambda>
641 <Statistics_entropy>0.27</Statistics_entropy>
642 </Statistics>
643 </Iteration_stat>
644 </Iteration>
645 <Iteration>
646 <Iteration_iter-num>23</Iteration_iter-num>
647 <Iteration_query-ID>Query_4</Iteration_query-ID>
648 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
649 <Iteration_query-len>348</Iteration_query-len>
650 <Iteration_hits>
651 <Hit>
652 <Hit_num>1</Hit_num>
653 <Hit_id>Subject_5</Hit_id>
654 <Hit_def>gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds</Hit_def>
655 <Hit_accession>Subject_5</Hit_accession>
656 <Hit_len>1047</Hit_len>
657 <Hit_hsps>
658 <Hsp>
659 <Hsp_num>1</Hsp_num>
660 <Hsp_bit-score>711.256</Hsp_bit-score>
661 <Hsp_score>1640</Hsp_score>
662 <Hsp_evalue>0</Hsp_evalue>
663 <Hsp_query-from>1</Hsp_query-from>
664 <Hsp_query-to>348</Hsp_query-to>
665 <Hsp_hit-from>1</Hsp_hit-from>
666 <Hsp_hit-to>1044</Hsp_hit-to>
667 <Hsp_query-frame>0</Hsp_query-frame>
668 <Hsp_hit-frame>1</Hsp_hit-frame>
669 <Hsp_identity>325</Hsp_identity>
670 <Hsp_positive>337</Hsp_positive>
671 <Hsp_gaps>0</Hsp_gaps>
672 <Hsp_align-len>348</Hsp_align-len>
673 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq>
674 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
675 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline>
676 </Hsp>
677 </Hit_hsps>
678 </Hit>
679 </Iteration_hits>
680 <Iteration_stat>
681 <Statistics>
682 <Statistics_db-num>0</Statistics_db-num>
683 <Statistics_db-len>0</Statistics_db-len>
684 <Statistics_hsp-len>18</Statistics_hsp-len>
685 <Statistics_eff-space>109230</Statistics_eff-space>
686 <Statistics_kappa>0.071</Statistics_kappa>
687 <Statistics_lambda>0.299</Statistics_lambda>
688 <Statistics_entropy>0.27</Statistics_entropy>
689 </Statistics>
690 </Iteration_stat>
691 </Iteration>
692 <Iteration>
693 <Iteration_iter-num>24</Iteration_iter-num>
694 <Iteration_query-ID>Query_4</Iteration_query-ID>
695 <Iteration_query-def>sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def>
696 <Iteration_query-len>348</Iteration_query-len>
697 <Iteration_hits>
698 <Hit>
699 <Hit_num>1</Hit_num>
700 <Hit_id>Subject_6</Hit_id>
701 <Hit_def>gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds</Hit_def>
702 <Hit_accession>Subject_6</Hit_accession>
703 <Hit_len>1344</Hit_len>
704 <Hit_hsps>
705 <Hsp>
706 <Hsp_num>1</Hsp_num>
707 <Hsp_bit-score>626.708</Hsp_bit-score>
708 <Hsp_score>1444</Hsp_score>
709 <Hsp_evalue>0</Hsp_evalue>
710 <Hsp_query-from>1</Hsp_query-from>
711 <Hsp_query-to>341</Hsp_query-to>
712 <Hsp_hit-from>23</Hsp_hit-from>
713 <Hsp_hit-to>1048</Hsp_hit-to>
714 <Hsp_query-frame>0</Hsp_query-frame>
715 <Hsp_hit-frame>2</Hsp_hit-frame>
716 <Hsp_identity>281</Hsp_identity>
717 <Hsp_positive>311</Hsp_positive>
718 <Hsp_gaps>1</Hsp_gaps>
719 <Hsp_align-len>342</Hsp_align-len>
720 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq>
721 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq>
722 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE</Hsp_midline>
723 </Hsp>
724 </Hit_hsps>
725 </Hit>
726 </Iteration_hits>
727 <Iteration_stat>
728 <Statistics>
729 <Statistics_db-num>0</Statistics_db-num>
730 <Statistics_db-len>0</Statistics_db-len>
731 <Statistics_hsp-len>18</Statistics_hsp-len>
732 <Statistics_eff-space>109230</Statistics_eff-space>
733 <Statistics_kappa>0.071</Statistics_kappa>
734 <Statistics_lambda>0.299</Statistics_lambda>
735 <Statistics_entropy>0.27</Statistics_entropy>
736 </Statistics>
737 </Iteration_stat>
738 </Iteration>
739 </BlastOutput_iterations>
740 </BlastOutput>
741