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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 11:39:20 -0500
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faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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1 <?xml version="1.0"?>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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2 <macros>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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3 <xml name="function">
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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4 <param type="select" label="Function type" name="function_type" display="radio">
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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5 <yield />
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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6 <option value="C">Constant</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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7 <option value="L">Linear [f(x) = y + z * x]</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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8 <option value="S">Square root [f(x) = y + z * x²]</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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9 <option value="G">Natural logarithm [f(x) = y + z * log(x)]</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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10 </param>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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11 <param type="integer" label="Constant term (y)" name="constant_term" value="0" />
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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12 <param type="integer" label="Coefficient (z)" name="coefficient_term" value="0" />
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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13 </xml>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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14 <xml name="single_paired_selector">
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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15 <param label="Single end or paired reads?" name="paired_selector" type="select">
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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16 <option value="paired_collection">Single collection of paired reads</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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17 <option value="paired_list">List of paired reads</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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18 <option value="paired">Reads are paired</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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19 <option value="single">Reads are unpaired</option>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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20 </param>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
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21 </xml>
faed168e996f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/hisat commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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22 </macros>