Mercurial > repos > devteam > get_flanks

comparison get_flanks.xml @ 2:0eae46dcc35c

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Added tool images.
author devteam <devteam@galaxyproject.org>
date Mon, 14 Apr 2014 09:17:59 -0400
parents 1f2b0650b1db
children 2fdec558c935
comparison
equal deleted inserted replaced
1:1f2b0650b1db 2:0eae46dcc35c
60 60
61 - running get flanks with Region: Around start, Offset: -200, Flank-length: 300 and Location: Upstream will return **(Red: Dataset positive strand; Blue: Flanks output)**:: 61 - running get flanks with Region: Around start, Offset: -200, Flank-length: 300 and Location: Upstream will return **(Red: Dataset positive strand; Blue: Flanks output)**::
62 62
63 chr22 500 800 NM_174568 0 + 63 chr22 500 800 NM_174568 0 +
64 64
65 .. image:: ${static_path}/operation_icons/flanks_ex1.gif 65 .. image:: flanks_ex1.gif
66 66
67 **Example 2** 67 **Example 2**
68 68
69 - For the following dataset:: 69 - For the following dataset::
70 70
72 72
73 - running get flanks with Region: Whole, Offset: 200, Flank-length: 300 and Location: Downstream will return **(Orange: Dataset negative strand; Magenta: Flanks output)**:: 73 - running get flanks with Region: Whole, Offset: 200, Flank-length: 300 and Location: Downstream will return **(Orange: Dataset negative strand; Magenta: Flanks output)**::
74 74
75 chr22 500 800 NM_028946 0 - 75 chr22 500 800 NM_028946 0 -
76 76
77 .. image:: ${static_path}/operation_icons/flanks_ex2.gif 77 .. image:: flanks_ex2.gif
78 78
79 </help> 79 </help>
80 80
81 81
82 </tool> 82 </tool>