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comparison macros.xml @ 14:91271de440f0 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/freebayes commit cce7fcdd5e8ba8636c751f9f974bf07a6845ba1c"
author iuc
date Wed, 01 Dec 2021 21:49:34 +0000
parents 5031b6656a2b
children a2feedafda6f
comparison
equal deleted inserted replaced
13:5031b6656a2b 14:91271de440f0
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.3.1</token> 2 <token name="@TOOL_VERSION@">1.3.5</token>
3 <xml name="requirements"> 3 <xml name="requirements">
4 <requirements> 4 <requirements>
5 <requirement type="package" version="@TOOL_VERSION@">freebayes</requirement> 5 <requirement type="package" version="@TOOL_VERSION@">freebayes</requirement>
6 <requirement type="package" version="1.9">samtools</requirement> 6 <requirement type="package" version="1.12">samtools</requirement>
7 <yield /> 7 <yield />
8 </requirements> 8 </requirements>
9 </xml> 9 </xml>
10 <xml name="citations"> 10 <xml name="citations">
11 <citations> 11 <citations>
30 <param name="processmode" type="select" label="Run in batch mode?" help="Selecting individual mode will generate one VCF dataset for each input BAM dataset. Selecting the merge option will produce one VCF dataset for all input BAM datasets" display="radio"> 30 <param name="processmode" type="select" label="Run in batch mode?" help="Selecting individual mode will generate one VCF dataset for each input BAM dataset. Selecting the merge option will produce one VCF dataset for all input BAM datasets" display="radio">
31 <option value="individual" selected="true">Run individually</option> 31 <option value="individual" selected="true">Run individually</option>
32 <option value="merge">Merge output VCFs</option> 32 <option value="merge">Merge output VCFs</option>
33 </param> 33 </param>
34 <when value="individual"> 34 <when value="individual">
35 <param name="input_bams" type="data" format="bam" label="BAM dataset"> 35 <param name="input_bams" type="data" format="bam,cram" label="BAM or CRAM dataset">
36 <yield /> 36 <yield />
37 </param> 37 </param>
38 </when> 38 </when>
39 <when value="merge"> 39 <when value="merge">
40 <param name="input_bams" type="data" format="bam" multiple="true" label="BAM dataset(s)"> 40 <param name="input_bams" type="data" format="bam,cram" multiple="true" label="BAM or CRAM dataset(s)">
41 <yield /> 41 <yield />
42 </param> 42 </param>
43 </when> 43 </when>
44 </conditional> 44 </conditional>
45 </xml> 45 </xml>