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comparison rgFastQC.xml @ 23:4585ffa39bd9 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit cd51396b097cf63734578cdac8fc6c64500c8b4b
author iuc
date Tue, 06 Aug 2024 06:11:51 +0000
parents a35575615aa4
children
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22:a35575615aa4 23:4585ffa39bd9
1 <tool id="fastqc" name="FastQC" version="0.74+galaxy0"> 1 <tool id="fastqc" name="FastQC" version="0.74+galaxy1" profile="23.0">
2 <description>Read Quality reports</description> 2 <description>Read Quality reports</description>
3 <xrefs> 3 <xrefs>
4 <xref type="bio.tools">fastqc</xref> 4 <xref type="bio.tools">fastqc</xref>
5 </xrefs> 5 </xrefs>
6 <requirements> 6 <requirements>
48 48
49 #if $limits.dataset and str($limits) > '' 49 #if $limits.dataset and str($limits) > ''
50 --limits '${limits}' 50 --limits '${limits}'
51 #end if 51 #end if
52 --threads \${GALAXY_SLOTS:-2} 52 --threads \${GALAXY_SLOTS:-2}
53 --dir \${TEMP:-\$_GALAXY_JOB_TMP_DIR}
53 --quiet 54 --quiet
54 --extract 55 --extract
55 #if $min_length: 56 #if $min_length:
56 --min_length $min_length 57 --min_length $min_length
57 #end if 58 #end if