Mercurial > repos > devteam > fastq_to_fasta
comparison macros.xml @ 4:5dbca5fbdc45 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/fastx_toolkit/fastq_to_fasta commit 4c002e52261da2e7609735883d91fa1610ce6ce7"
| author | iuc |
|---|---|
| date | Thu, 30 Jan 2020 18:26:18 +0000 |
| parents | 4498e994e31b |
| children | b8e3c0a52f33 |
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| 3:4498e994e31b | 4:5dbca5fbdc45 |
|---|---|
| 19 ]]> | 19 ]]> |
| 20 </token> | 20 </token> |
| 21 <token name="@GZIP@"> | 21 <token name="@GZIP@"> |
| 22 <![CDATA[ | 22 <![CDATA[ |
| 23 #if $input.is_of_type('fasta.gz', 'fastqsanger.gz', 'fastqsolexa.gz', 'fastqillumina.gz'): | 23 #if $input.is_of_type('fasta.gz', 'fastqsanger.gz', 'fastqsolexa.gz', 'fastqillumina.gz'): |
| 24 -z | 24 | gzip -c |
| 25 #elif $input.is_of_type('fastqsanger.bz2', 'fastqsolexa.bz2', 'fastqillumina.bz2'): | |
| 26 | bzip2 -c | |
| 25 #end if | 27 #end if |
| 26 ]]> | 28 ]]> |
| 27 </token> | 29 </token> |
| 28 <xml name="requirements"> | 30 <xml name="requirements"> |
| 29 <requirements> | 31 <requirements> |