Mercurial > repos > devteam > fasta_compute_length

comparison utils/fasta_to_len.py @ 5:a51da10f8caf draft

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"planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/fasta_compute_length commit 34a6c9f94a5722bb7d2f887618aafa410a770e91"
author devteam
date Mon, 02 Mar 2020 11:45:47 +0000
parents 79cd53e23207
children
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4:79cd53e23207 5:a51da10f8caf
4 Output: tabular 4 Output: tabular
5 Return titles with lengths of corresponding seq 5 Return titles with lengths of corresponding seq
6 """ 6 """
7 7
8 import sys 8 import sys
9
10 assert sys.version_info[:2] >= (2, 4)
11 9
12 10
13 def compute_fasta_length(fasta_file, out_file, keep_first_char, keep_first_word=False): 11 def compute_fasta_length(fasta_file, out_file, keep_first_char, keep_first_word=False):
14 keep_first_char = int(keep_first_char) 12 keep_first_char = int(keep_first_char)
15 fasta_title = '' 13 fasta_title = ''