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comparison dividePgSnpAlleles.xml @ 2:6698e4d94ea5

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Remove spurious version strings.
author Dave Bouvier <dave@bx.psu.edu>
date Tue, 26 Nov 2013 12:40:27 -0500
parents 137ec95c8ca6
children 158ae5769173
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1:e342ab27851f 2:6698e4d94ea5
4 #if $refcol.ref == "yes" #dividePgSnpAlleles.pl -ref=$refcol.ref_column $input1 > $out_file1 4 #if $refcol.ref == "yes" #dividePgSnpAlleles.pl -ref=$refcol.ref_column $input1 > $out_file1
5 #else #dividePgSnpAlleles.pl $input1 > $out_file1 5 #else #dividePgSnpAlleles.pl $input1 > $out_file1
6 #end if 6 #end if
7 </command> 7 </command>
8 <inputs> 8 <inputs>
9 <param format="interval" version="1.0.0" name="input1" type="data" label="pgSnp dataset" /> 9 <param format="interval" name="input1" type="data" label="pgSnp dataset" />
10 <conditional version="1.0.0" name="refcol"> 10 <conditional name="refcol">
11 <param version="1.0.0" name="ref" type="select" label="Dataset has a column with the reference allele:"> 11 <param name="ref" type="select" label="Dataset has a column with the reference allele:">
12 <option value="yes">yes</option> 12 <option value="yes">yes</option>
13 <option value="no" selected="true">no</option> 13 <option value="no" selected="true">no</option>
14 </param> 14 </param>
15 <when value="yes"> 15 <when value="yes">
16 <param version="1.0.0" name="ref_column" type="data_column" data_ref="input1" label="Column with reference allele" /> 16 <param name="ref_column" type="data_column" data_ref="input1" label="Column with reference allele" />
17 </when> 17 </when>
18 <when value="no"> <!-- do nothing --> 18 <when value="no"> <!-- do nothing -->
19 </when> 19 </when>
20 </conditional> 20 </conditional>
21 </inputs> 21 </inputs>
22 <outputs> 22 <outputs>
23 <data format="interval" version="1.0.0" name="out_file1" /> 23 <data format="interval" name="out_file1" />
24 </outputs> 24 </outputs>
25 <tests> 25 <tests>
26 <test> 26 <test>
27 <param name='input1' value='dividePgSnp_input.pgSnp' ftype='interval' /> 27 <param name='input1' value='dividePgSnp_input.pgSnp' ftype='interval' />
28 <param name='ref' value='no' /> 28 <param name='ref' value='no' />
29 <output version="1.0.0" name="output" file="dividePgSnp_output.txt" /> 29 <output name="output" file="dividePgSnp_output.txt" />
30 </test> 30 </test>
31 </tests> 31 </tests>
32 32
33 <help> 33 <help>
34 **Dataset formats** 34 **Dataset formats**