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comparison data_manager/twobit_builder.xml @ 3:e697ffc1197e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_twobit_builder commit 984fd87f7bb30469ac078cf32d2cbb42e62c11dd
author iuc
date Fri, 09 Jun 2017 05:25:37 -0400
parents c9896bb1f03c
children fced964b054a
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2:c9896bb1f03c 3:e697ffc1197e
3 <requirement type="package" version="324">ucsc-fatotwobit</requirement> 3 <requirement type="package" version="324">ucsc-fatotwobit</requirement>
4 </requirements> 4 </requirements>
5 <description>builder</description> 5 <description>builder</description>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 python '$__tool_directory__/twobit_builder.py' 7 python '$__tool_directory__/twobit_builder.py'
8 '${out_file}' 8 '$out_file'
9 --fasta_filename '${all_fasta_source.fields.path}' 9 --fasta_filename '$all_fasta_source.fields.path'
10 --fasta_dbkey '${all_fasta_source.fields.dbkey}' 10 --fasta_dbkey '$all_fasta_source.fields.dbkey'
11 --fasta_description '${all_fasta_source.fields.name}' 11 --fasta_description '$all_fasta_source.fields.name'
12 ]]></command> 12 ]]></command>
13 <inputs> 13 <inputs>
14 <param name="all_fasta_source" type="select" label="Source FASTA Sequence"> 14 <param name="all_fasta_source" type="select" label="Source FASTA Sequence">
15 <options from_data_table="all_fasta"/> 15 <options from_data_table="all_fasta"/>
16 </param> 16 </param>