Mercurial > repos > devteam > data_manager_twobit_builder

comparison data_manager_conf.xml @ 0:26e3ae5f74ed draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/data_managers/data_manager_twobit_builder commit 4ec9eb1570ea116d83f5464a786af6e14fb5b57d
author devteam
date Fri, 02 Oct 2015 17:32:37 -0400
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children 298d15849a14
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-1:000000000000 0:26e3ae5f74ed
1 <?xml version="1.0"?>
2 <data_managers>
3
4 <data_manager tool_file="data_manager/twobit_builder.xml" id="twobit_builder" version="0.0.1">
5 <data_table name="lastz_seqs">
6 <output>
7 <column name="value" />
8 <column name="name" />
9 <column name="path" output_ref="out_file" >
10 <move type="file">
11 <source>${path}</source>
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/seq/${path}</target>
13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation>
15 </column>
16 </output>
17 </data_table>
18
19 <data_table name="twobit">
20 <output>
21 <column name="value" />
22 <column name="path" output_ref="out_file" ><!-- move happens above -->
23 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation>
24 </column>
25 </output>
26 </data_table>
27
28 <data_table name="alignseq_seq">
29 <output>
30 <column name="type" /><!-- always seq -->
31 <column name="value" /><!-- also dbkey -->
32 <column name="path" output_ref="out_file" ><!-- move happens above -->
33 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/seq/${path}</value_translation>
34 </column>
35 </output>
36 </data_table>
37
38 </data_manager>
39
40 </data_managers>