Mercurial > repos > devteam > data_manager_fetch_genome_dbkeys_all_fasta

comparison data_manager_conf.xml @ 0:c89e003f518a draft

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author devteam
date Tue, 03 Feb 2015 10:05:30 -0500
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children cd0196536dfd
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-1:000000000000 0:c89e003f518a
1 <?xml version="1.0"?>
2 <data_managers>
3
4 <data_manager tool_file="data_manager/data_manager_fetch_genome_all_fasta_dbkeys.xml" id="fetch_genome_all_fasta_dbkeys">
5 <data_table name="all_fasta">
6 <output>
7 <column name="value" />
8 <column name="dbkey" />
9 <column name="name" />
10 <column name="path" output_ref="out_file" >
11 <move type="file">
12 <source>${path}</source>
13 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/seq/${path}</target>
14 </move>
15 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/seq/${path}</value_translation>
16 <value_translation type="function">abspath</value_translation>
17 </column>
18 </output>
19 </data_table>
20 <data_table name="__dbkeys__">
21 <output>
22 <column name="value" />
23 <column name="name" />
24 <column name="len_path" output_ref="out_file" >
25 <move type="file">
26 <source>${len_path}</source>
27 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/len/${len_path}</target>
28 </move>
29 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/len/${len_path}</value_translation>
30 <value_translation type="function">abspath</value_translation>
31 </column>
32 </output>
33 </data_table>
34 </data_manager>
35
36 </data_managers>