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comparison bwa_macros.xml @ 5:b59a6178a6e0 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/bwa commit dead2eaab58698fe02b8bb068f8d859eba551e8d
author devteam
date Sat, 30 Sep 2017 13:36:50 -0400
parents b4dfb5470bf3
children a4d167793afa
comparison
equal deleted inserted replaced
4:774491f4a074 5:b59a6178a6e0
1 <macros> 1 <macros>
2 <import>read_group_macros.xml</import> 2 <import>read_group_macros.xml</import>
3 3
4 <token name="@VERSION@">0.7.15</token> 4 <token name="@VERSION@">0.7.16</token>
5 5
6 <token name="@set_rg_string@"> 6 <token name="@set_rg_string@">
7 #set $rg_string = "@RG\\tID:" + str($rg_id) 7 #set $rg_string = "@RG\\tID:" + str($rg_id)
8 #set $rg_string += $format_read_group("\\tSM:", $rg_sm) 8 #set $rg_string += $format_read_group("\\tSM:", $rg_sm)
9 #set $rg_string += $format_read_group("\\tPL:", $rg_pl) 9 #set $rg_string += $format_read_group("\\tPL:", $rg_pl)
33 ]]></token> 33 ]]></token>
34 34
35 <xml name="requirements"> 35 <xml name="requirements">
36 <requirements> 36 <requirements>
37 <requirement type="package" version="@VERSION@">bwa</requirement> 37 <requirement type="package" version="@VERSION@">bwa</requirement>
38 <requirement type="package" version="1.3.1">samtools</requirement> 38 <requirement type="package" version="1.5">samtools</requirement>
39 </requirements> 39 </requirements>
40 </xml> 40 </xml>
41 41
42 <xml name="stdio"> 42 <xml name="stdio">
43 <stdio> 43 <stdio>