Mercurial > repos > devteam > bowtie2

comparison bowtie2_wrapper.xml @ 27:c9105910063f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bowtie2 commit 41371d219eaafc811eadf7646a7f0ecf002e4239"
author iuc
date Tue, 12 Jan 2021 16:57:59 +0000
parents 1fc8d53bc352
children 8681e741a037
comparison
equal deleted inserted replaced
26:1fc8d53bc352 27:c9105910063f
1 <tool id="bowtie2" name="Bowtie2" version="2.3.4.3+galaxy0" profile="18.01"> 1 <tool id="bowtie2" name="Bowtie2" version="@TOOL_VERSION@+galaxy0" profile="18.01">
2 <description>- map reads against reference genome</description> 2 <description>- map reads against reference genome</description>
3 <macros> 3 <macros>
4 <import>bowtie2_macros.xml</import> 4 <import>bowtie2_macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="2.3.4.1">bowtie2</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">bowtie2</requirement>
8 <requirement type="package" version="1.9">samtools</requirement> 8 <requirement type="package" version="1.11">samtools</requirement>
9 </requirements> 9 </requirements>
10 <version_command>bowtie2 --version</version_command> 10 <version_command>bowtie2 --version</version_command>
11 <command detect_errors="exit_code"><![CDATA[ 11 <command detect_errors="exit_code"><![CDATA[
12 ## Use pipefail if available to quit with first non-zero exit code 12 ## Use pipefail if available to quit with first non-zero exit code
13 set -o | grep -q pipefail && set -o pipefail; 13 set -o | grep -q pipefail && set -o pipefail;