comparison bowtie2_macros.xml @ 17:69f044db2445 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bowtie2 commit 0f9578a65e86cc159aadf1a9b37aaf3621f19456
author iuc
date Tue, 14 Nov 2017 15:02:02 -0500
parents 7e0b333f39e1
children 5e52e98ff239
comparison
equal deleted inserted replaced
16:def46fdb3909 17:69f044db2445
4 <token name="@define_read_group_helpers@"> 4 <token name="@define_read_group_helpers@">
5 #def identifier_or_name($input1) 5 #def identifier_or_name($input1)
6 #if hasattr($input1, 'element_identifier') 6 #if hasattr($input1, 'element_identifier')
7 #return $input1.element_identifier 7 #return $input1.element_identifier
8 #else 8 #else
9 #return $input1.name.rstrip('.gz').rstrip('.fastq').rstrip('.fq').rstrip('bz2') 9 #return $input1.name.rstrip('.gz').rstrip('.fastq').rstrip('.fq').rstrip('.bz2')
10 #end if 10 #end if
11 #end def 11 #end def
12 12
13 #def clean(name) 13 #def clean(name)
14 #import re 14 #import re