Mercurial > repos > devteam > bowtie2
comparison bowtie2_macros.xml @ 17:69f044db2445 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bowtie2 commit 0f9578a65e86cc159aadf1a9b37aaf3621f19456
author | iuc |
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date | Tue, 14 Nov 2017 15:02:02 -0500 |
parents | 7e0b333f39e1 |
children | 5e52e98ff239 |
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16:def46fdb3909 | 17:69f044db2445 |
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4 <token name="@define_read_group_helpers@"> | 4 <token name="@define_read_group_helpers@"> |
5 #def identifier_or_name($input1) | 5 #def identifier_or_name($input1) |
6 #if hasattr($input1, 'element_identifier') | 6 #if hasattr($input1, 'element_identifier') |
7 #return $input1.element_identifier | 7 #return $input1.element_identifier |
8 #else | 8 #else |
9 #return $input1.name.rstrip('.gz').rstrip('.fastq').rstrip('.fq').rstrip('bz2') | 9 #return $input1.name.rstrip('.gz').rstrip('.fastq').rstrip('.fq').rstrip('.bz2') |
10 #end if | 10 #end if |
11 #end def | 11 #end def |
12 | 12 |
13 #def clean(name) | 13 #def clean(name) |
14 #import re | 14 #import re |