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comparison fixedValueColumn.xml @ 0:787fa5c2c738 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/add_value commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 11:15:22 -0500
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children 4c6ec423baae
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-1:000000000000 0:787fa5c2c738
1 <tool id="addValue" name="Add column" version="1.0.0">
2 <description>to an existing dataset</description>
3 <command interpreter="perl">fixedValueColumn.pl "${input}" "${out_file1}" "${exp}" "${iterate}"</command>
4 <inputs>
5 <param name="exp" type="text" value="1" label="Add this value"/>
6 <param format="tabular" name="input" type="data" label="to Dataset" help="Dataset missing? See TIP below" />
7 <param name="iterate" type="select" label="Iterate?">
8 <option value="no">NO</option>
9 <option value="yes">YES</option>
10 </param>
11 </inputs>
12 <outputs>
13 <data format="input" name="out_file1" metadata_source="input"/>
14 </outputs>
15 <tests>
16 <test>
17 <param name="exp" value="1"/>
18 <param name="input" value="1.bed"/>
19 <param name="iterate" value="no"/>
20 <output name="out_file1" file="eq-addvalue.dat"/>
21 </test>
22 </tests>
23 <help>
24
25 .. class:: infomark
26
27 **TIP:** If your data is not TAB delimited, use *Text Manipulation-&gt;Convert*
28
29 -----
30
31 **What it does**
32
33 You can enter any value and it will be added as a new column to your dataset
34
35 -----
36
37 **Example**
38
39 If you original data looks like this::
40
41 chr1 10 100 geneA
42 chr2 200 300 geneB
43 chr2 400 500 geneC
44
45 Typing **+** in the text box will generate::
46
47 chr1 10 100 geneA +
48 chr2 200 300 geneB +
49 chr2 400 500 geneC +
50
51
52 You can also add line numbers by selecting **Iterate: YES**. In this case if you enter **1** in the text box you will get::
53
54 chr1 10 100 geneA 1
55 chr2 200 300 geneB 2
56 chr2 400 500 geneC 3
57
58
59
60 </help>
61 </tool>