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comparison germline/TRDV.fa @ 0:fe4001bdf8d4 draft

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author davidvanzessen
date Tue, 09 Dec 2014 03:55:01 -0500
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-1:000000000000 0:fe4001bdf8d4
1 >M22198|TRDV1*01|Homo sapiens|F|V-REGION|363..649|287 nt|1| | | | |287+0=287| |rev-compl|
2 gcccagaaggttactcaagcccagtcatcagtatccatgccagtgaggaaagcagtcacc
3 ctgaactgcctgtatgaaacaagttggtggtcatattatattttttggtacaagcaactt
4 cccagcaaagagatgattttccttattcgccagggttctgatgaacagaatgcaaaaagt
5 ggtcgctattctgtcaacttcaagaaagcagcgaaatccgtcgccttaaccatttcagcc
6 ttacagctagaagattcagcaaagtacttttgtgctcttggggaact
7 >X15207|TRDV2*01|Homo sapiens|F|V-REGION|208..495|288 nt|1| | | | |288+0=288| |rev-compl|
8 gccattgagttggtgcctgaacaccaaacagtgcctgtgtcaataggggtccctgccacc
9 ctcaggtgctccatgaaaggagaagcgatcggtaactactatatcaactggtacaggaag
10 acccaaggtaacacaatcactttcatataccgagaaaaggacatctatggccctggtttc
11 aaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaagatactt
12 gcaccatcagagagagatgaagggtcttactactgtgcctgtgacacc
13 >Y13426|TRDV2*02|Homo sapiens|F|V-REGION|1..283|283 nt|1| | | | |283+0=283|partial in 5'|rev-compl|
14 attgagttggtgcctgaacaccaaacagtgcctgtgtcaatagggatccctgccaccctc
15 aggtgctccatgaaaggagaagcgatcggtaactactatatcaactggtacaggaagacc
16 caaggtaacacaatcactttcatataccgagaaaaggacatctatggccctggtttcaaa
17 gacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaagatacttgca
18 ccatcagagagagatgaagggtcttactactgtgcctgtgaca
19 >AE000661|TRDV2*03|Homo sapiens|F|V-REGION|176712..176999|288 nt|1| | | | |288+0=288| |rev-compl|
20 gccattgagttggtgcctgaacaccaaacagtgcctgtgtcaataggggtccctgccacc
21 ctcaggtgctccatgaaaggagaagcgatcggtaactactatatcaactggtacaggaag
22 acccaaggtaacacaatgactttcatataccgagaaaaggacatctatggccctggtttc
23 aaagacaatttccaaggtgacattgatattgcaaagaacctggctgtacttaagatactt
24 gcaccatcagagagagatgaagggtcttactactgtgcctgtgacacc
25 >M23326|TRDV3*01|Homo sapiens|F|V-REGION|303..592|290 nt|1| | | | |290+0=290| |rev-compl|
26 tgtgacaaagtaacccagagttccccggaccagacggtggcgagtggcagtgaggtggta
27 ctgctctgcacttacgacactgtatattcaaatccagatttattctggtaccggataagg
28 ccagattattcctttcagtttgtcttttatggggataacagcagatcagaaggtgcagat
29 tttactcaaggacggttttctgtgaaacacattctgacccagaaagcctttcacttggtg
30 atctctccagtaaggactgaagacagtgccacttactactgtgcctttag
31 >X15261|TRDV3*02|Homo sapiens|F|V-REGION|316..605|290 nt|1| | | | |290+0=290| |rev-compl|
32 tgtgacaaagtaacccagagttccccggaccagacggtggcgagtggcagtgaggtggta
33 ctgctctgcacttacgacactgtatattcaaatccagatttattctggtactggataagg
34 ccagattattcctttcagtttgtcttttatggggataacagcagatcagaaggtgcagat
35 tttactcaaggacggttttctgtgaaacacattctgacccagaaagcctttcacttggtg
36 atctctccagtaaggactgaagacagtgccacttactactgtgcctttag