# HG changeset patch
# User davidvanzessen
# Date 1408719766 14400
# Node ID c7d3b68040d717eb4cee622728b938fbb959e6b3
# Parent  f4ff7450ef16261b4cdf468dcfa56e8ba2a2a2d8
Uploaded

diff -r f4ff7450ef16 -r c7d3b68040d7 r_wrapper.sh
--- a/r_wrapper.sh	Fri Aug 22 11:02:20 2014 -0400
+++ b/r_wrapper.sh	Fri Aug 22 11:02:46 2014 -0400
@@ -89,7 +89,7 @@
 		echo "<tr><td>Coincidence Type</td><td>Raw Coincidence Freq</td><td>Coincidence Weight</td><td>Coincidences, Weighted</td></tr>" >> $outputFile
 		while IFS=, read type count weight weightedCount
 		do
-			echo "<tr><td>$type</td><td>$count</td><td>$weight</td><td>$weightedCount</td></tr>" >> $outputFile
+			echo "<tr><td><a href='ClonalitySequences_${sample}_${type}.csv'>$type</a></td><td>$count</td><td>$weight</td><td>$weightedCount</td></tr>" >> $outputFile
 		done < $outputDir/ClonalityOverView_$sample.csv
 		echo "</table></div>" >> $outputFile
 	done