# HG changeset patch # User davidvanzessen # Date 1389692049 18000 # Node ID 3fb05bdd5299b86be0f2afe10ff57467d668c089 # Parent 6ab4c67af3b7ffe8b537dfebb766b75857cdc4cd Uploaded diff -r 6ab4c67af3b7 -r 3fb05bdd5299 RScript.r --- a/RScript.r Fri Jan 10 03:40:06 2014 -0500 +++ b/RScript.r Tue Jan 14 04:34:09 2014 -0500 @@ -267,6 +267,7 @@ ReplicateReads = data.frame(data.table(clonalityFrame)[, list(Type=.N), by=c("Sample", "Replicate", "VDJCDR3")]) ReplicateReads = data.frame(data.table(ReplicateReads)[, list(Reads=.N), by=c("Sample", "Replicate")]) + clonalFreqCount$Reads = as.numeric(clonalFreqCount$Reads) ReplicateReads$squared = ReplicateReads$Reads * ReplicateReads$Reads ReplicatePrint <- function(dat){