Mercurial > repos > davidvanzessen > plotting_merged
comparison plotting_merged.xml @ 40:2e2a29d505c7 draft
Uploaded
| author | davidvanzessen |
|---|---|
| date | Fri, 22 Nov 2013 07:51:04 -0500 |
| parents | bdf048a0b414 |
| children | 20763d15d641 |
comparison
equal
deleted
inserted
replaced
| 39:a9ad03d52680 | 40:2e2a29d505c7 |
|---|---|
| 1 <tool id="plotting_merged" name="Plotting the merged data" version="1.0"> | 1 <tool id="plotting_merged" name="Plotting the merged data" version="1.0"> |
| 2 <description>Creating a graph of the merged reports.</description> | 2 <description>Creating a graph of the merged reports.</description> |
| 3 <command interpreter="bash"> | 3 <command interpreter="bash"> |
| 4 r_wrapper.sh $in_file $out_file $out_file.files_path | 4 r_wrapper.sh $in_file $out_file $out_file.files_path $clonaltype_select |
| 5 </command> | 5 </command> |
| 6 <inputs> | 6 <inputs> |
| 7 <param name="in_file" format="tabular" type="data" label="Data to Process" /> | 7 <param name="in_file" format="tabular" type="data" label="Data to Process" /> |
| 8 <param name="clonaltype_select" type="select" label="Clonal Type Definition"> | |
| 9 <option value="Top.V.Gene,CDR3.Seq">Top.V.Gene, CDR3.Seq</option> | |
| 10 <option value="Top.V.Gene,CDR3.Seq.DNA">Top.V.Gene, CDR3.Seq.DNA</option> | |
| 11 <option value="Top.V.Gene,Top.J.Gene,CDR3.Seq">Top.V.Gene, Top.J.Gene, CDR3.Seq</option> | |
| 12 <option value="Top.V.Gene,Top.J.Gene,CDR3.Seq.DNA">Top.V.Gene, Top.J.Gene, CDR3.Seq.DNA</option> | |
| 13 <option value="Top.V.Gene,Top.D.Gene,Top.J.Gene,CDR3.Seq.DNA">Top.V.Gene, Top.D.Gene, Top.J.Gene, CDR3.Seq.DNA</option> | |
| 14 </param> | |
| 15 | |
| 8 </inputs> | 16 </inputs> |
| 9 <outputs> | 17 <outputs> |
| 10 <data format="html" name="out_file" /> | 18 <data format="html" name="out_file" /> |
| 11 </outputs> | 19 </outputs> |
| 12 <help> | 20 <help> |