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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <set_environment version="1.0">
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4 </set_environment>
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5
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6 <package name="igBlastn" version="1.0.0">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url" target_filename="R-3.0.1.tar.gz">
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10 http://cran.rstudio.com/src/base/R-3/R-3.0.1.tar.gz
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11 </action>
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12 <action type="shell_command">./configure --with-x=no</action>
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13 <action type="shell_command">make</action>
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14
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15 <action type="move_directory_files">
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16 <source_directory>R-3.0.1</source_directory>
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17 <destination_directory>$INSTALL_DIR/R-3.0.1</destination_directory>
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18 </action>
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19
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20 <action type="set_environment">
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21 <environment_variable name="R_LOCATION" action="set_to">$INSTALL_DIR/R-3.0.1</environment_variable>
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22 </action>
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23 </install>
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24 <readme>
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25 Download and configure R.
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26 </readme>
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27 </package>
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28 </tool_dependency>
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