# HG changeset patch # User davidvanzessen # Date 1427379380 14400 # Node ID b0242cd1da349bb893c2916f999dda83618bd782 # Parent 4b83265b268658be3e486da9dfa37be4b3eb54da Uploaded diff -r 4b83265b2686 -r b0242cd1da34 gene_identification.py --- a/gene_identification.py Thu Mar 26 10:00:24 2015 -0400 +++ b/gene_identification.py Thu Mar 26 10:16:20 2015 -0400 @@ -41,8 +41,8 @@ print "Number of input sequences:", len(dic) #lambda/kappa reference sequence -searchstrings = {"ca": "catccccgaccagccccaaggtcttcccgctgagcctctgcagcacccagccagatgggaacgtggtcatcgcctgcctg", - "cg": "ctccaccaagggcccatcggtcttccccctggcaccctcctccaagagcacctctgggggcacagcggccctgggctgcctggtcaaggactacttccccgaaccggtgacggtgtcgtggaactcaggcgccctgacca", +searchstrings = {"ca": "catccccgaccagccccaaggtcttcccgctgagcctctgcagcacccagccagatgggaacgtggtcatcgcctgcctgg", + "cg": "ctccaccaagggcccatcggtcttccccctggcaccctcctccaagagcacctctgggggcacagcggccctgggctgcctggtcaaggactacttccccgaaccggtgacggtgtcgtggaactcaggcgccctgaccag", "cm": "gggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccc"} compiledregex = {"ca": [],