# HG changeset patch
# User davidvanzessen
# Date 1458302570 14400
# Node ID 1558fbbc19efbb04dff442ff0706052d0a2415a3
# Parent  79696e273853a1c9268a0f6be30ab8ca407c9f54
Uploaded

diff -r 79696e273853 -r 1558fbbc19ef gene_identification.py
--- a/gene_identification.py	Wed Mar 16 11:18:55 2016 -0400
+++ b/gene_identification.py	Fri Mar 18 08:02:50 2016 -0400
@@ -40,10 +40,12 @@
 			
 print "Number of input sequences:", len(dic)
 
+#old cm sequence: gggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccc
+
 #lambda/kappa reference sequence
 searchstrings = {"ca": "catccccgaccagccccaaggtcttcccgctgagcctctgcagcacccagccagatgggaacgtggtcatcgcctgcctgg",
                  "cg": "ctccaccaagggcccatcggtcttccccctggcaccctcctccaagagcacctctgggggcacagcggccctgggctgcctggtcaaggactacttccccgaaccggtgacggtgtcgtggaactcaggcgccctgaccag",
-                 "cm": "gggagtgcatccgccccaacccttttccccctcgtctcctgtgagaattccc"}
+                 "cm": "gggagtgcatccgccccaacc"} #new (shorter) cm sequence
 
 compiledregex = {"ca": [],
                  "cg": [],