Mercurial > repos > davidvanzessen > mutation_analysis
diff wrapper.sh @ 3:a0b27058dcac draft
Uploaded
| author | davidvanzessen | 
|---|---|
| date | Wed, 17 Sep 2014 07:25:17 -0400 | 
| parents | 2f4298673519 | 
| children | 069419cccba4 | 
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--- a/wrapper.sh Wed Sep 10 10:33:29 2014 -0400 +++ b/wrapper.sh Wed Sep 17 07:25:17 2014 -0400 @@ -1,6 +1,5 @@ #!/bin/bash dir="$(cd "$(dirname "$0")" && pwd)" - input=$1 output=$2 outdir=$3 @@ -12,6 +11,7 @@ cat $PWD/files/*/7_* > $PWD/mutationanalysis.txt cat $PWD/files/*/8_* > $PWD/mutationstats.txt cat $PWD/files/*/10_* > $PWD/hotspots.txt + cp $dir/HS12RSS.txt $outdir/ cp $dir/HS23RSS.txt $outdir/
