Mercurial > repos > davidvanzessen > mutation_analysis

diff wrapper.sh @ 15:8a40634fd4b3 draft

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author davidvanzessen
date Mon, 30 Mar 2015 05:11:25 -0400
parents 257e98fd3b54
children 2bb24ebbbc38
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line diff
--- a/wrapper.sh	Mon Mar 30 05:08:28 2015 -0400
+++ b/wrapper.sh	Mon Mar 30 05:11:25 2015 -0400
@@ -13,6 +13,8 @@
 cat $PWD/files/*/8_* > $PWD/mutationstats.txt
 cat $PWD/files/*/10_* > $PWD/hotspots.txt
 
+echo "${BLASTN_DIR}"
+
 
 echo "identification"
 python $dir/gene_identification.py --input $PWD/summary.txt --output $outdir/annotatedsummary.txt