Mercurial > repos > davidvanzessen > mutation_analysis
diff piechart.r @ 0:74d2bc479bee draft
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author | davidvanzessen |
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date | Mon, 18 Aug 2014 04:04:37 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/piechart.r Mon Aug 18 04:04:37 2014 -0400 @@ -0,0 +1,24 @@ +if (!("ggplot2" %in% rownames(installed.packages()))) { + install.packages("ggplot2", repos="http://cran.xl-mirror.nl/") +} +library(ggplot2) + +args <- commandArgs(trailingOnly = TRUE) + +vls = args[1] +lbls = args[2] +name = args[3] +output = args[4] + +vls = as.numeric(unlist(strsplit(vls, ","))) +lbls = unlist(strsplit(lbls, ",")) + +pc = ggplot(data.frame(Type=lbls, vls=vls), aes(x = factor(1), y=vls, fill=Type)) +pc = pc + geom_bar(width = 1, stat = "identity") +pc = pc + coord_polar(theta="y") +pc = pc + xlab(" ") + ylab(" ") + ggtitle(name) + +png(filename=output) +#pie(vls, labels=lbls, col=rainbow(length(vls)), main=name) +pc +dev.off()