Mercurial > repos > davidvanzessen > mutation_analysis
diff wrapper.sh @ 123:0453ea4d9f14 draft
Uploaded
author | davidvanzessen |
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date | Mon, 22 Aug 2016 07:00:23 -0400 |
parents | 3d64b3efd352 |
children | 4a93146f87aa |
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--- a/wrapper.sh Wed Aug 17 08:29:07 2016 -0400 +++ b/wrapper.sh Mon Aug 22 07:00:23 2016 -0400 @@ -236,7 +236,7 @@ echo "---------------- $func table ----------------<br />" >> $log cat $outdir/mutations_${func}.txt $outdir/hotspot_analysis_${func}.txt > $outdir/data_${func}.txt - + echo "<table class='pure-table pure-table-striped'>" >> $output echo "<thead><tr><th>info</th>" >> $output for gene in ${genes[@]} @@ -360,6 +360,7 @@ echo "<table class='pure-table pure-table-striped'>" >> $output echo "<thead><tr><th>info</th><th>link</th></tr></thead>" >> $output echo "<tr><td>The complete dataset</td><td><a href='merged.txt'>Download</a></td></tr>" >> $output +echo "<tr><td>The SHM Overview table as a dataset</td><td><a href='data_sum.txt'>Download</a></td></tr>" >> $output echo "<tr><td>The alignment info on the unmatched sequences</td><td><a href='unmatched.txt'>Download</a></td></tr>" >> $output echo "<tr><td>Motif data per sequence ID</td><td><a href='motif_per_seq.txt'>Download</a></td></tr>" >> $output echo "<tr><td>Mutation data per sequence ID</td><td><a href='mutation_by_id.txt'>Download</a></td></tr>" >> $output