Mercurial > repos > davidvanzessen > mutation_analysis

comparison change_o/makedb.sh @ 125:e87dcca14bd6 draft

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Uploaded
author davidvanzessen
date Mon, 29 Aug 2016 03:28:49 -0400
parents 613278c1bde0
children
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124:4a93146f87aa 125:e87dcca14bd6
27 27
28 mkdir $PWD/outdir 28 mkdir $PWD/outdir
29 29
30 echo "makedb: $PWD/outdir" 30 echo "makedb: $PWD/outdir"
31 31
32 /data/users/david/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions 32 python3 $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
33 #/data/users/david/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
33 #/home/galaxy/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions 34 #/home/galaxy/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
34 35
35 mv $PWD/outdir/output_db-pass.tab $output 36 mv $PWD/outdir/output_db-pass.tab $output
37
38 rm -rf $PWD/outdir/