Mercurial > repos > davidvanzessen > mutation_analysis

comparison mutation_analysis.xml @ 19:c518cf0d4adb draft

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author davidvanzessen
date Wed, 01 Apr 2015 05:09:59 -0400
parents 6f8392d090bd
children d84c9791d8c4
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18:9dd557f17153 19:c518cf0d4adb
1 <tool id="mutation_analysis_shm" name="Mutation Analysis" version="1.0"> 1 <tool id="mutation_analysis_shm" name="Mutation Analysis" version="1.0">
2 <description></description> 2 <description></description>
3 <command interpreter="bash"> 3 <command interpreter="bash">
4 wrapper.sh $in_file $out_file $out_file.files_path ${in_file.name} 4 wrapper.sh $in_file $method $out_file $out_file.files_path ${in_file.name}
5 </command> 5 </command>
6 <inputs> 6 <inputs>
7 <param name="in_file" type="data" label="IMGT zip file to be analysed" /> 7 <param name="in_file" type="data" label="IMGT zip file to be analysed" />
8 <param name="method" type="select" label="Identification method" help="" >
9 <option value="custom" selected="true">custom</option>
10 <option value="blastn">blastn</option>
11 </param>
8 </inputs> 12 </inputs>
9 <outputs> 13 <outputs>
10 <data format="html" name="out_file" label = "Mutation analysis on ${in_file.name}"/> 14 <data format="html" name="out_file" label = "Mutation analysis on ${in_file.name}"/>
11 </outputs> 15 </outputs>
12 <help> 16 <help>