Mercurial > repos > davidvanzessen > mutation_analysis

comparison mutation_analysis.xml @ 46:42e39033514b draft

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author davidvanzessen
date Thu, 05 Nov 2015 10:16:32 -0500
parents 57d941adced4
children 099cc1254f74
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45:57d941adced4 46:42e39033514b
21 </param> 21 </param>
22 22
23 <param name="unique" type="select" label="Remove duplicates based on" help="" > 23 <param name="unique" type="select" label="Remove duplicates based on" help="" >
24 <option value="AA.JUNCTION_V_subclass" selected="true">AA.JUNCTION + V + subclass</option> 24 <option value="AA.JUNCTION_V_subclass" selected="true">AA.JUNCTION + V + subclass</option>
25 <option value="AA.JUNCTION_subclass">AA.JUNCTION + subclass</option> 25 <option value="AA.JUNCTION_subclass">AA.JUNCTION + subclass</option>
26 <option value="V_subclass">V + subclass</option>
27 <option value="AA.JUNCTION_V">AA.JUNCTION + V</option> 26 <option value="AA.JUNCTION_V">AA.JUNCTION + V</option>
28 <option value="AA.JUNCTION">AA.JUNCTION</option> 27 <option value="AA.JUNCTION">AA.JUNCTION</option>
29 <option value="none">Don't remove duplicates</option> 28 <option value="none">Don't remove duplicates</option>
30 </param> 29 </param>
31 30
34 <data format="html" name="out_file" label = "Mutation analysis on ${in_file.name}"/> 33 <data format="html" name="out_file" label = "Mutation analysis on ${in_file.name}"/>
35 </outputs> 34 </outputs>
36 <help> 35 <help>
37 Takes an IMGT zip (http://www.imgt.org/HighV-QUEST/search.action) file and creates a summarization of the mutation analysis. 36 Takes an IMGT zip (http://www.imgt.org/HighV-QUEST/search.action) file and creates a summarization of the mutation analysis.
38 </help> 37 </help>
39 <!--<requirements> 38 <requirements>
40 <requirement type="package" version="1.0">blastn</requirement> 39 <requirement type="package" version="1.0">blastn</requirement>
41 </requirements>--> 40 </requirements>
42 </tool> 41 </tool>