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comparison HS23RSS.txt @ 2:2f4298673519 draft

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author davidvanzessen
date Wed, 10 Sep 2014 10:33:29 -0400
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1:856b5b718d21 2:2f4298673519
1 Gene Sequence
2 IGLV2-8 CACAGTGTTTTAAGTCAATGAGGAAGTAAGACCAAAACC
3 IGLV4-3 CACAGTGACACAGATGAAGGGGAAGTGAGGCCAAAACTC
4 TRBV21-1 CACAGTGCCGAATGTTAGCCCTTCTTAGAACACAAACTC
5 IGHV1-17 CACAGTGCGAAAACCCACATCCTGAGAGTGTCAGAAACC
6 IGHV1-14 CACAGTGTGAAAACCCACATCCTGAGAGAGTCAGAAATC
7 IGHV3-15 CACAGTGAGGGGAGGTCAGTGTGAGCCCGGACACAAACC
8 IGHV1-18 CACAGTGTGAAAACCCACATCCTGAGGGTTTCAGAAACC
9 IGHV3-11 CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC
10 IGLV2-5 CACAGTGGTCCAAGTTCTTGGGGAACTGAGACGAAAACC
11 IGHV3-13 CACAGTGAGGGGAAGTCAGTATGAGCCCAGACACAAACC
12 TRAV2 CACAGAGGCAGGGAACCCATGAAGAGCTGAACAGAAACA
13 TRAV3 CACACTGATAGGGGCTGCAGGGGGAGCAGAACACAAACT
14 TRAV4 CACAGTGAGACAGATGGGCCTGCACCTGTGCCGTTTTCC
15 TRAV5 CACATTGCTTCTCAGGCACCTGTATCCTGTACCCAAACC
16 TRBV6-4 CACAGTGCTGCACAGCCATCTCCTCTCTGTACATAAATG
17 IGHV3-19 CACTGTGAGAGGACGGAAGTGTGAGCCCAGACACAAACC
18 TRBV6-6 CACAGCGCTACAAGACCATCTCCTCTCTGCACATAAAGG
19 TRBV18 CACATTGATGCAGAGCCACATCCTCTCAGTCCACAAACA
20 TRBV6-1 CACAGCGCTGCATGGCCGTCTCCTCTCTGCACATAAAGG
21 TRBV6-2 CACAGTGCTGCACGGCTGTCTCCTCTCTGCACAGAAAGG
22 TRBV6-3 CACAGTGCTGCACGGCTGTCTCCTCTCTGCACAGAAAGG
23 TRBV12-4 CACAGCGCTGCAGAATCACCCCTTTCCTGTGCAGAAACC
24 TRAV27 CACAGTGCTCTTGAGGCACCTGCTGCCTGCACCCAAACC
25 TRBV5-4 CACAGCCCGGCAGAGTCTCTGACATTCTATACATAAACT
26 TRBV5-3 CACAGCCCTGCAGAGTCACTGGAACTCTGTGCACTAATC
27 TRGV3 CACAGTGATTCAGACCTGTCCTACACCACACTGAAAATC
28 TRBV5-1 CACAGCCCTACAAAGCCAACCACATTCTGTGCACAAACC
29 IGHV3-9 CACAGTGAGGGGAAGTCAGCGAGAGCCCAGACAAAAACC
30 TRGV8 CACAGTGATTCAGACCTGTGCTACACCACACTGAAAATC
31 TRBV5-8 CACAGCCCAGCAGAATCACTGACATTCTGTATATAAACT
32 TRDV2 CACCCTGCTGCAGCTCTACTTCTGAGCAGCTCAAAAACC
33 IGKJ1 CACAGTGAGAGCTCTCCATTGTCTTGCTGAACAGAAACC
34 IGKJ2 CACAATGGTTCCTCTTAACTTCCCTCCTATACAAAAACT
35 IGKJ4 CACAGTGAGGGATCTCACCCTTTCCCCTCAACAAAAACC
36 TRAV26 CACACTGGGACAGATGGGGCTGCACCTGTGCAATATCTC
37 TRAV25 CACAGTGCTCCCCAAGCACCTGCTGCCTGTCTCCAAATC
38 TRAV24 CACAGTGCTGTTCAGGCACCTGCAGCCCATACGCAAACC
39 IGHV1-24 CACAGTGTGAAAACCCACATCCTGAGAGCGTCAGAAACC
40 TRAV41 CACAGTGCTCCCCAGGCACCTGGAGCCCGTACCTAAACT
41 IGLV5-52 CACAGTGCTCCAGACCCATGAGGAAGTAAGACAAAACCC
42 IGLV10-54 CACAGTGCCTCAGGCCAGTGGGGAAGTGAGATAAAAACT
43 IGHV3-64 CACAGTGAGGAGAAGTTAATGTGGGACCATGCAGAAACC
44 IGHV3-66 CACAGTGAGGGGAGGCCATTGTGCGCCCAGACACAAACC
45 TRBV7-9 CACAGCATGGCACAGTCGCCTCCTTCCTGCTCACAAACC
46 TRBV7-8 CACAGCATGGCACAGTTGCCTCCTTCCTGTTCACAAACC
47 IGLV1-40 CACAGTGCTCAGGCGTGTGTGTGAACTGAGACAAGAACC
48 IGLV3-21 CACGGTGACACAGGCAGATGAGGAAGTGAGACAAAAACA
49 IGHV7-4-1 CACAGTGTGGAAACCCACATCCTGAGAGTGTCAAAAACC
50 IGLV3-27 CACAGTGACACAGGCAGATGGAGAAATGAGACACAAACC
51 TRBV4-1 CACAGCCTTGCAGAGTCACCGCTTTCCTGTGCAGAAACC
52 IGLV1-41 CACAGTGCTCCAGGCCAATGGGGAACTGAGACAAGAACC
53 TRAV13-1 CACATTGCTTCCCAGGCACCTGCTACCCGTACACAAACC
54 TRAV13-2 CACATTGCTTTCCAGGCATCTGTAACCATCACCCAAACC
55 TRBV5-6 CACAGCCCATCAGAGTCACTGACGTTCTGTATATAAACT
56 IGLV3-25 CACAGTGACACAAGCAGACAGGGAAGTGAGACATAAACC
57 TRBV10-2 CACAGTGCTGCACAGCTGCCTCCTCTCTGCACGGAAATG
58 TRBV10-3 CACAGTGCTGCATGGCTGCCTCCTCTCTGCACGTAAACA
59 TRBV10-1 CACAGTGCTGCACAGCTGCCTCCTCTCTGCACATAAAGG
60 IGLV6-57 CACAGTGCTCCAGACCCATGGGGAAGTGAGACAGAAACT
61 TRBV6-5 CACAGCGCTACAAGGCCGTCTCCTCTCTGCACATAAAGG
62 IGHV3-73 CACAGTGAGGGGAGGTCAGTGTGAGCCCGGACACAAACT
63 IGHV3-72 CACAGCGAGGGGAGGTCAGTGTGAGCCCGGACACAAACC
64 IGLV1-47 CACAGTGCTCCAGGCCCAGGGGGAACTGAGACAAGAACC
65 TRAV9-2 CACAGTGACAGGGACTGCAGGGGGAGCTGAGCACAAACT
66 IGLV7-46 CACAGTGACAGACCCATGAGAGGAACCAAGACATAAACC
67 TRBV6-7 CACAGCGCTGCAAGGCTGTCTCCTCTCTGCACATAAAGG
68 TRBV3-1 CACAGCCCTGCAAAGTCACTGCATCCCTGTGCACAAACC
69 IGLV7-43 CACAGTGACAGACTCATAAGAGGAACCAAGACATAAACC
70 IGHV1-8 CACAGTGTGAAAAACCACATCCTCAGAGAGTCAGAAACC
71 IGLV1-51 CACAGTGCTCCAGCCCAATGGGGAACTGAGACAAGAACC
72 IGLV1-50 CACAGTGCTCCAGGCCCAGGGGGAGGTGAGAGAAGAACC
73 IGHV1-3 CACAGTGTGAAAACCCACATCCTGAGAGTGTCAGAAACC
74 IGHV1-2 CACAGTGTGAAAACCCACATCCTGAGGGTGTCAGAAACC
75 IGHV4-39 CACAGTGTGGAAACCCACATCCCGAGGGAGTCAGAAACC
76 TRBV2 CACAGCCTTGCAAAGACAACTCCAGCCTGTGCAAAATCC
77 TRDD3 CACAGTGCTACAAAACCTACAGAGACCTGTACAAAAACT
78 TRDD2 CACACAGGTTGGAGTGCATTAAGCCTTTGTCCAAAAACA
79 TRAV29/DV5 CACAGTGCTCTCCAGGCACCTGCAGCCCGTACTCAAACC
80 IGLV3-10 CACAGTGACACTGGCAGATGGGGAAGTGAGACACAAACC
81 TRBV27 CACAGTGTTGCACAGCCAGCTGCTCTCTGCACAAAAACA
82 TRBV5-5 CACAGCCCGGCAGAATCACTGACATTCTGTATATAAACT
83 TRGV10 CACATACTAGAACTGTTGAAACAACATGCACAAAATCCC
84 TRGV11 CACAGTGTTCGAGTTGTCAAGATAAGGTACACAGAAACT
85 TRGV5 CACAGTGATTCAGACCTGTCCTACACCACACTGAAAATC
86 TRBV30 CACACTGAGCTGGGTGGGGCAGACATCTGTGCAAAAACC
87 IGHV3-48 CACAGTGAGGGGAGGTCAGTGTGACACCAGACACAAACC
88 IGHV3-49 CACAGTGAGGGGAGGTCAATGTGAGCCCAGACACAAACC
89 TRGV2 CACAGTGATTCAGATCCGCCCTACACCACACTGAAAATC
90 IGLV CACAGTGCTGCAGGCACATGGGGAACCGAGACAAAAACC
91 IGHV3-43 CACAGTGAGGGGAAGTCAGCGAGAGCCCAGACAAAAACC
92 IGHV3-41 CACAGTGAGAGGAAGTCCGTGTGAGCCCAGACACAAACC
93 IGHV3-7 CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC
94 HPRT_23 CACTGTAGGTTCATCTTTATGGAGATGCTCATGGCCTCA
95 TRGV9 CACAGCAGCAGACAGTTTGAGCCATCCCATTCAATAAAT
96 IGLV4-60 CACAGTGATACAGGCAGATGAGGAAGTGGGACAAAATCC
97 TRBV28 CACAGCGCAGCACAGCCGCATCCTCTCTGCACAAAAAGA
98 TRBV25-1 CACAGTGCTACATGGATACCGACACTCCGCACAGAAAGG
99 IGLV4-69 CACAGTGACACAGGCAGATGAGGAAGTGGGACAGAAACC
100 IGHV4-28 CACAGTGAGGGGAGGTGAGTGTGAGCCCAGACACAAACC
101 TRBV3-2 CACAGCCTTACAGAGCCACTGCATCCCTGTGCACAAACC
102 IGHV6-1 CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC
103 TRAV19 CACAGTGAGATGGGTGCCTGTGGGAGCCCTACAAAAACC
104 TRAV10 CACTGTGCTCCACAGGCACTTGAAGCCAGTATGCAAACC
105 TRAV17 CACAGTGTTCCCCAGGAACCTGCAGCCTCTACGCAAACC
106 TRBV4-2 CACAGCCTTGCAGAGTCACCGCTTTCCTGTGCAGAAACC
107 TRBV4-3 CACAGCCTTGCAGAGTCACCGCTTTCCTGTGCAGAAACC
108 IGHV3-53 CACAGTGAGGGGAGGTCAGTGTGAGCCCAGACACAAACC
109 IGHV3-52 CACAGTGAGAGGCACAGTGAGGGGAGGTCAGTGTGAGCC
110 TRBV7-3 CACAGCATGACACAATCGCCTCCTTCCTGCTCATAAACC
111 TRBV7-2 CACAGCATGGCACAGTCGCCTCCTTCCTGCTCATAAACC
112 TRBV7-7 CACAGCATGGCACAGTCGCCTCCTTCCTGTTCACAAACC
113 TRBV7-6 CACAGTGTGGCATAGTCGCCTCCTTCCTGTTCACAAACC
114 IGHV2-5 CACAAAGACACAGCCCAGGGCACCTCCTGTACAAAAACC
115 IGLV3-13 CACAGTGACACAGGCAGATGGGGAAGTGAGACACAAATC
116 IGLV3-16 CACAGTGACACAAGGAGACAGGGAAGTGAAACATAAACC
117 IGLV3-19 CACAGTGACACAGACAGATGGGGAAGTGAGACAGAAACC
118 IGHJ3 CACAGGGACACAGTCCGTTCCTAGACCCAGACACAAACC
119 IGHV1-45 CACAGTGTGAAAACCCACATCCTGAGACCGTCAGAAACC
120 IGHV1-46 CACAGTGTGAGAAACCACATCCTCAGAGTGTCAGAAACC
121 IGLV8-61 CACAGTGATTTAAACCTATGAGGAAGTGCAACTAAAACC
122 IGHV4-59 CACAGTGAGGGGAGGTGAGTGTGAGCCCAGACAAAAACC
123 TRAV1-1 CACAGTGACTATGAGGCCTCCTTAACTGTGCCAAAATTC
124 TRAV1-2 CACGGTGACTATGAGGCCTCTTTAGCTGCACCAAAATTC
125 TRGV7 CACAGTGATTCACACCTGCCCTACACCACACTGAAAATC
126 IGHV3-20 CACAGTGAGGGGAAGCCAGTGAGAGCCCAGACACAAACG
127 IGHV3-21 CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC
128 IGHV3-23 CACAGTGAGGGAAGTCATTGTGAGCCCAGACACAAACCT
129 IGLV2-23 CACAGTGGTCCAAGTTCATGGGGAACTGAGACCAAAACC
130 TRBD1 CACAATGATTCAACTCTACGGGAAACCTTTACAAAAACC
131 TRGV4 CACAGTGATTCAGATCCGCCCTACACCACACTGAAAACC
132 TRAV12-1 CACAGTGCTCCCCAGACACCTGCAGTCTGTACCCAAACC
133 TRAV12-3 CACAGTGCTCCCCAGACACTTGCAGTCTGTACCCAAACC
134 TRAV12-2 CACAGTGCTCCCCAGACACCTGCAGTCTGTACCCAAACC
135 IGLV3-6 CACAGTGACACAGGCAGATTAGGAAGTGAGACACAAACC
136 IGLV3-1 CACAGTGACACAGGCAGATGCGGAAGTGAGACAGAAACC
137 IGHV1-58 CACAGTGTGAAAACCCACATCCTGAGAGTGTCAGAAACG
138 TRBD2 CACGATGATTCAGGTAGAGGAGGTGCTTTTACAAAAAAC
139 IGLV3-9 CACAGTGACACAGGCAGATGAAGAAGTGAGACACAAACC
140 TRBV6-8 CACAGCGCTACAAGGTTGTCTCCTCTCTGCACATAAAGG
141 TRBV9 CACAGCCCTGCATGAGCATCAGCCTTCTGTGCAATAACA
142 IGHV3-35 CACTGTGAGAGGTCGGAAGTGTGAGCCCAGACACAAACC
143 IGHV3-33 CACAGTGAGGGGAGGTCATTGTGCGCCCAGACACAAACC
144 IGLV2-14 CACAGTGGTCCAAGTTCCTGGGGAACTGAGACCAAAACC
145 IGHV3-30 CACAGTGAGGGGAAGTCATTGTGCGCCCAGACACAAACC
146 TRAV8-1 CACAGTGTCTGGGACTGCAAAGGGAGCTGAACACAAACT
147 IGLV2-18 CACAGAGGTCCAAGTTCCTGGGGAACTGAGACCAAAACC
148 TRAV14/DV4 CACAGTGACAGAACTGTCGGAGGGAGGTGTACAAAAGCC
149 IGHV2-26 CACAGAGACACAGCCCAGGATGCCTCCTGTACAAGAACC
150 TRBV16 CACAGTGTTAAATATTAGCTAATCTTAGGACACAGACTC
151 TRBV15 CACAGAGCTGCAGTGCTTCCTGCTCTCTGTTCATAAACC
152 TRBV14 CACAGTGCTTCACAGTCGTGCCCTTGCTGTGCAAAACCA
153 TRBV13 CACAGCATGGCACAGTCGCCTCCTTCCTGCTCACAAACC
154 TRBV11-3 CACAGTGTAGCAGAGACACTTCCCTCCTGTGCAGAAAAC
155 TRBV19 CACAGTGAAGCACGGATGTCGCCTCTCTGTGCATAAATG
156 TRBV11-2 CACAGTGTAGCAGAGACACTTCCCTCCTGTGCAGAAAAC
157 TRAV38-1 CACAATGAGATGAGCAGCAGGTAGAGGCTTACAGAAATC
158 TRBV12-5 CACAGCGCTGCAGAATCACCTGCTCCCTGTGCAGAAACC
159 TRBV12-2 CACAGCGCTGCAGAATCTCCCCCTCCCTGTGCAGAAACT
160 TRBV12-3 CACAGCGCTGCAGAATCACCCCTTTCCTGTGCAGAAAAC
161 IGHV1-69 CACAGTGTGAAAACCCACATCCTGAGAGTGTCAGAAACC
162 LMO1_23 CACAGTGGCTCACCACCCCACACAGCCCTCACTCTGGCA
163 IGLV5-45 CACAGTGACACACACAGATGGGGAAGTGGGACAAAAACC
164 IGLV5-37 CACAGTGACACACACAGATGGGAAAGTGGGACAAAAACC
165 TRAV23/DV6 CACAGTGCTCCCCAGGCACCTGAAGCCTGTACCCAAACC
166 TRDV1 CACAGTGTTTGAAGTGATAGTAAAAGCAAAACAAAAACC
167 TRBV20-1 CACAGCGCCAGGAGGGGATCAGACACCGCGGCAAGAACC
168 IGHV2-10 CACAGAGACAGAGCCCAGGGTGCCTCTTGTACAAGACCC
169 TRBV29-1 CACAGTGCGGGGCACAGATCAAAGATCTGAGCAAGAACC
170 TRBV23-1 CACAGCACTGAAATGTCAGTTCCTCTTAGCACACAAACT
171 TRAV34 CACAGCGATCTTCAGGCCTCTATCAGCTGTCTCCAAACC
172 TRAV30 CACAGTGATACCCAGGCCTCCAAGACCTGTACTCAAACC
173 TAL1_23 CACAGCCTCGCGCATTTCTGTATATTGCGTAAGGAAAAG
174 TRAV39 CACAGTGCTCCCCTGACGCCACCAGTCTGTACCCAAACC