Mercurial > repos > davidvanzessen > mutation_analysis

comparison mutation_analysis.py @ 32:2a7343e4be5a draft

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Uploaded
author davidvanzessen
date Thu, 09 Apr 2015 08:58:59 -0400
parents c623690e3b81
children ac9a4307861a
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31:c623690e3b81 32:2a7343e4be5a
9 9
10 args = parser.parse_args() 10 args = parser.parse_args()
11 11
12 infile = args.input 12 infile = args.input
13 genes = str(args.genes).split(",") 13 genes = str(args.genes).split(",")
14 print "includefr1 =", args.includefr1
14 include_fr1 = True if args.includefr1 == "yes" else False 15 include_fr1 = True if args.includefr1 == "yes" else False
15 outfile = args.output 16 outfile = args.output
16 17
17 genedic = dict() 18 genedic = dict()
18 19