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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <set_environment version="1.0">
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4 </set_environment>
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5
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6 <package name="igBlastn" version="1.0.0">
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7 <install version="1.0">
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8 <actions>
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9 <action type="shell_command">wget ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz -P $INSTALL_DIR</action>
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10 <action type="shell_command">tar zxvf $INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux.tar.gz -C $INSTALL_DIR</action>
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11 <action type="set_environment">
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12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/ncbi-igblast-1.0.0/bin</environment_variable>
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13 </action>
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14 </actions>
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15 </install>
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16 <readme>
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17 Downloads the igblastn-1.0.0 executable from NCBI and uses a fixed database included in this tool.
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18 </readme>
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19 </package>
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20 </tool_dependency> |
