Mercurial > repos > davidvanzessen > igblast_human

changeset 33:413fe007965e draft

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Uploaded
author davidvanzessen
date Tue, 24 Sep 2013 09:42:58 -0400
parents a8a3bb59d0f9
children 8b2161007a67
files tool_dependencies.xml
diffstat 1 files changed, 20 insertions(+), 11 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Sep 24 09:35:02 2013 -0400
+++ b/tool_dependencies.xml	Tue Sep 24 09:42:58 2013 -0400
@@ -19,20 +19,29 @@
                 	<environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0</environment_variable>
                 </action>
                 
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.nhr</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.nin</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.nog</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.nsd</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.nsi</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.nsq</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.phr</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.pin</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.pog</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.psd</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.psi</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V.psq</action>
+				<action type="download_file">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V_prot</action>
+
                 <action type="make_directory">$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data</action>
                 <action type="make_directory">$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data/human</action>
+                
+                <action type="move_file">
+				    <source>human_V</source>
+				    <destination>$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data/human</destination>
+                </action>
 
-                <action type="download_by_url">
-            		ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data/human/human_V*
-            	</action>
-            	<action type="move_file">
-		    		<source>human_V*</source>
-			   		<destination>$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data/human/</destination>
-	       		</action>
-	       		<action type="move_directory_files">
-		    		<source_directory>.</source_directory>
-			   		<destination_directory>$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data/human</destination_directory>
-	       		</action>
             </actions>
         </install>
         <readme>