Mercurial > repos > davidvanzessen > igblast_human

comparison tool_dependencies.xml @ 38:cc443e49b89e draft

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author davidvanzessen
date Tue, 24 Sep 2013 10:48:34 -0400
parents 215aa111db64
children 1369672de2ce
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37:215aa111db64 38:cc443e49b89e
20 </action> 20 </action>
21 21
22 <action type="make_directory">$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data</action> 22 <action type="make_directory">$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data</action>
23 <action type="make_directory">$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data/human</action> 23 <action type="make_directory">$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data/human</action>
24 24
25 <action type="shell_command">wget -r -np -nH --cut-dirs=4 -R index.html -P $INSTALL_DIR/internal_data "ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data"</action> 25 <action type="shell_command">wget -r -np -nH --cut-dirs=4 -R index.html -P $INSTALL_DIR/ncbi-igblast-1.0.0/internal_data "ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/internal_data"</action>
26 <action type="move_directory_files"> 26
27 <source_directory>internal_data</source_directory> 27 <action type="shell_command">wget -r -np -nH --cut-dirs=4 -R index.html -P $INSTALL_DIR/ncbi-igblast-1.0.0/database "ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/database"</action>
28 <destination_directory>$INSTALL_DIR/ncbi-igblast-1.0.0/internal_data</destination_directory> 28
29 </action> 29 <action type="shell_command">wget -r -np -nH --cut-dirs=4 -R index.html -P $INSTALL_DIR/ncbi-igblast-1.0.0/optional_file "ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/optional_file"</action>
30 30
31 </actions> 31 </actions>
32 </install> 32 </install>
33 <readme> 33 <readme>
34 Downloads igBlast with the human_V internal data file. 34 Downloads igBlast with the human_V internal data file.