Mercurial > repos > davidvanzessen > igblast_human

comparison tool_dependencies.xml @ 52:8da1f108446d draft

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author davidvanzessen
date Wed, 27 Nov 2013 07:06:35 -0500
parents e7f986491f46
children fe9acb633402
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51:e7f986491f46 52:8da1f108446d
21 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0</environment_variable> 21 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0</environment_variable>
22 </action> 22 </action>
23 <action type="set_environment"> 23 <action type="set_environment">
24 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/ncbi-igblast-1.0.0/bin</environment_variable> 24 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/ncbi-igblast-1.0.0/bin</environment_variable>
25 </action> 25 </action>
26 <action type="shell_command">env</action> 26 <action type="shell_command">echo "$REPOSITORY_INSTALL_DIR"</action>
27 <action type="shell_command">unzip $REPOSITORY_INSTALL_DIR/database.zip -d $INSTALL_DIR/ncbi-igblast-1.0.0/</action> 27 <action type="shell_command">unzip $REPOSITORY_INSTALL_DIR/database.zip -d $INSTALL_DIR/ncbi-igblast-1.0.0/</action>
28 28
29 29
30 </actions> 30 </actions>
31 </install> 31 </install>