Mercurial > repos > davidvanzessen > igblast_human

comparison tool_dependencies.xml @ 2:40954f0f8d14 draft

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author davidvanzessen
date Tue, 24 Sep 2013 04:01:28 -0400
parents 0ccde52e24a1
children 65f8bb1b0701
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1:0ccde52e24a1 2:40954f0f8d14
5 5
6 <package name="igBlastn" version="1.0.0"> 6 <package name="igBlastn" version="1.0.0">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions> 8 <actions>
9 <action type="download_by_url">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz</action> 9 <action type="download_by_url">ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/1.0.0/ncbi-igblast-1.0.0-x64-linux.tar.gz</action>
10 <action type="move_file">
11 <source>ncbi-igblast-1.0.0-x64-linux.tar.gz</source>
12 <destination>$INSTALL_DIR</destination>
13 </action>
10 <action type="shell_command">tar -zxvf ncbi-igblast-1.0.0-x64-linux.tar.gz</action> 14 <action type="shell_command">tar -zxvf ncbi-igblast-1.0.0-x64-linux.tar.gz</action>
11 15
12 <action type="set_environment"> 16 <action type="set_environment">
13 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux</environment_variable> 17 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0-x64-linux</environment_variable>
14 </action> 18 </action>