Mercurial > repos > davidvanzessen > igblast_human

comparison tool_dependencies.xml @ 10:2e90843d6993 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author davidvanzessen
date Tue, 24 Sep 2013 05:10:59 -0400
parents afb3bd4f7186
children 38b9cde6b435
comparison
equal deleted inserted replaced
9:afb3bd4f7186 10:2e90843d6993
18 </action> 18 </action>
19 19
20 <action type="set_environment"> 20 <action type="set_environment">
21 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0</environment_variable> 21 <environment_variable name="IGDATA" action="set_to">$INSTALL_DIR/ncbi-igblast-1.0.0</environment_variable>
22 </action> 22 </action>
23 23
24 <action type="shell_command">
25 wget -r -np -nH --cut-dirs=4 -R index.html "ftp://ftp.ncbi.nih.gov/blast/executables/igblast/release/database"
26 </action>
27 <action type="move_directory_files">
28 <source_directory>database</source_directory>
29 <destination_directory>$INSTALL_DIR/ncbi-igblast-1.0.0/database</destination_directory>
30 </action>
31 24
32 </actions> 25 </actions>
33 </install> 26 </install>
34 <readme> 27 <readme>
35 Installs R with apt-get. 28 Installs R with apt-get.