Mercurial > repos > davidvanzessen > ig_blast_merge
comparison igblastmerge.xml @ 0:1f6de7db44b6 draft
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| author | davidvanzessen |
|---|---|
| date | Mon, 23 Sep 2013 05:42:54 -0400 |
| parents | |
| children | 30bbd9fe953c |
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| -1:000000000000 | 0:1f6de7db44b6 |
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| 1 <tool id="igblastmerge" name="IgBlastMerge" version="1.0"> | |
| 2 <description>Converting one or more "igBLASTreport parser" outputs for "VDJ Blast plot"</description> | |
| 3 <command interpreter="python"> | |
| 4 igblastmerge.py | |
| 5 --input | |
| 6 #for $i, $f in enumerate($files) | |
| 7 ${f.file} | |
| 8 #end for | |
| 9 --id | |
| 10 #for $i, $f in enumerate($files) | |
| 11 $(f.id) | |
| 12 #end for | |
| 13 --output $out_file | |
| 14 </command> | |
| 15 <inputs> | |
| 16 <repeat name="files" title="File" min="1" default="1"> | |
| 17 <param name="file" format="tabular" type="data" label="Data to Process" /> | |
| 18 <param name="id" type="text" label="ID" /> | |
| 19 </repeat> | |
| 20 </inputs> | |
| 21 <outputs> | |
| 22 <data format="tabular" name="out_file" /> | |
| 23 </outputs> | |
| 24 <help> | |
| 25 Merge several files | |
| 26 </help> | |
| 27 | |
| 28 </tool> |