# HG changeset patch
# User davidvanzessen
# Date 1441108187 14400
# Node ID a3c4e3e62e1054e38e2e7b68f050022527f1da8b
# Parent  02cf2dd19564e1ee85e50c006b786f2cb73f180c
Uploaded

diff -r 02cf2dd19564 -r a3c4e3e62e10 extract_duplicates.r
--- a/extract_duplicates.r	Fri Aug 21 10:49:14 2015 -0400
+++ b/extract_duplicates.r	Tue Sep 01 07:49:47 2015 -0400
@@ -5,7 +5,7 @@
 header=(args[3] == "yes")
 out_file=args[4]
 
-dat = read.table(input, header=header, sep="\t", fill=T, stringsAsFactors=F)
+dat = read.table(input, header=header, sep="\t", fill=T, stringsAsFactors=F, quote="")
 
 duplicates = dat[duplicated(dat[,column]),column]