Mercurial > repos > davidvanzessen > extract_duplicates

diff extract_duplicates.sh @ 2:1f1640608245 draft default tip

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author davidvanzessen
date Tue, 01 Sep 2015 08:34:27 -0400
parents 02cf2dd19564
children
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--- a/extract_duplicates.sh	Tue Sep 01 07:49:47 2015 -0400
+++ b/extract_duplicates.sh	Tue Sep 01 08:34:27 2015 -0400
@@ -1,7 +1,8 @@
 input=$1
 column=$2
 header=$3
-out_file=$4
+regex_filter=$4
+out_file=$5
 
 dir="$(cd "$(dirname "$0")" && pwd)"
-Rscript --verbose $dir/extract_duplicates.r ${input} ${column} ${header} ${out_file} 2>&1
+Rscript --verbose $dir/extract_duplicates.r ${input} ${column} ${header} "${regex_filter}" ${out_file} 2>&1